Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.93□□□□□ -1.94
PTPN4P29074 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.93□□□□□ -1.94
PTPN4P29074 MTND4LP3-201ENST00000468320 276 ntBASIC2.93□□□□□ -1.94
PTPN4P29074 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.93□□□□□ -1.94
PTPN4P29074 RN7SL297P-201ENST00000483161 293 ntBASIC2.93□□□□□ -1.94
PTPN4P29074 AC106872.3-201ENST00000495104 446 ntBASIC2.93□□□□□ -1.94
PTPN4P29074 HSPE1P23-201ENST00000509838 286 ntBASIC2.93□□□□□ -1.94
PTPN4P29074 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
PTPN4P29074 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
PTPN4P29074 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.93□□□□□ -1.94
PTPN4P29074 SNORA31.21-201ENST00000517180 77 ntBASIC2.93□□□□□ -1.94
PTPN4P29074 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.93□□□□□ -1.94
PTPN4P29074 CASP1P1-201ENST00000526345 212 ntBASIC2.93□□□□□ -1.94
PTPN4P29074 AC034105.3-201ENST00000565294 442 ntBASIC2.93□□□□□ -1.94
PTPN4P29074 Z99289.3-201ENST00000605586 594 ntBASIC2.93□□□□□ -1.94
PTPN4P29074 AC004067.1-201ENST00000608733 700 ntBASIC2.93□□□□□ -1.94
PTPN4P29074 AC072039.2-201ENST00000608883 439 ntBASIC2.93□□□□□ -1.94
PTPN4P29074 AL359198.2-201ENST00000611836 194 ntBASIC2.93□□□□□ -1.94
PTPN4P29074 AC100793.4-201ENST00000613683 429 ntBASIC2.93□□□□□ -1.94
PTPN4P29074 AC013476.2-201ENST00000614456 459 ntBASIC2.93□□□□□ -1.94
PTPN4P29074 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.93□□□□□ -1.94
PTPN4P29074 PCMTD1P7-201ENST00000634506 357 ntBASIC2.93□□□□□ -1.94
PTPN4P29074 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
PTPN4P29074 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.93□□□□□ -1.94
PTPN4P29074 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
PTPN4P29074 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PTPN4P29074 AC008669.1-201ENST00000565823 2178 ntBASIC2.93□□□□□ -1.94
PTPN4P29074 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PTPN4P29074 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PTPN4P29074 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.92□□□□□ -1.94
PTPN4P29074 AC022336.2-201ENST00000568966 2538 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PTPN4P29074 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
PTPN4P29074 RNU6-198P-201ENST00000384258 104 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 RNU6-754P-201ENST00000391166 107 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PTPN4P29074 MIR1305-201ENST00000408300 86 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.92□□□□□ -1.94
PTPN4P29074 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.92□□□□□ -1.94
PTPN4P29074 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.92□□□□□ -1.94
PTPN4P29074 HMGN2P30-201ENST00000423237 256 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.92□□□□□ -1.94
PTPN4P29074 SETP8-201ENST00000435341 628 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 ARPC3P1-201ENST00000437218 533 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 AC025750.2-201ENST00000442609 450 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.92□□□□□ -1.94
PTPN4P29074 AC016696.1-201ENST00000446949 318 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 MTND2P24-201ENST00000453434 806 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.92□□□□□ -1.94
PTPN4P29074 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.92□□□□□ -1.94
PTPN4P29074 AL139824.2-201ENST00000458731 1095 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 RPL30P9-201ENST00000465586 330 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 UBE2DNL-203ENST00000474922 222 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 AC022447.3-201ENST00000506865 495 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 AC109464.2-201ENST00000510242 943 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 RAC1P5-201ENST00000512182 576 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.92□□□□□ -1.94
PTPN4P29074 SNORA3.4-201ENST00000515969 96 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 RNU6-798P-201ENST00000516912 103 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 RN7SKP272-201ENST00000516988 232 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.92□□□□□ -1.94
PTPN4P29074 AC087373.1-201ENST00000524920 491 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.92□□□□□ -1.94
PTPN4P29074 AP003497.1-201ENST00000528472 562 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 AP003461.1-201ENST00000528866 78 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.92□□□□□ -1.94
PTPN4P29074 ELOCP31-201ENST00000540463 467 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.92□□□□□ -1.94
PTPN4P29074 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.92□□□□□ -1.94
PTPN4P29074 HMGB1P6-201ENST00000569046 646 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 AC010653.1-201ENST00000571108 881 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.92□□□□□ -1.94
PTPN4P29074 AC020895.1-201ENST00000595362 272 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 AC008443.7-201ENST00000622195 246 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 AC017037.3-201ENST00000625016 472 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PTPN4P29074 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
PTPN4P29074 AC104454.1-201ENST00000421341 1401 ntBASIC2.92□□□□□ -1.94
PTPN4P29074 AC012321.1-201ENST00000561622 1588 ntBASIC2.91□□□□□ -1.94
PTPN4P29074 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PTPN4P29074 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.91□□□□□ -1.94
PTPN4P29074 ZNF519P1-201ENST00000449011 1626 ntBASIC2.91□□□□□ -1.94
PTPN4P29074 SNORA54-201ENST00000384281 123 ntBASIC2.91□□□□□ -1.94
PTPN4P29074 TAS2R15P-201ENST00000390674 928 ntBASIC2.91□□□□□ -1.94
PTPN4P29074 AL590084.2-201ENST00000401481 382 ntBASIC2.91□□□□□ -1.94
PTPN4P29074 RPL7P25-201ENST00000404151 721 ntBASIC2.91□□□□□ -1.94
PTPN4P29074 RNU6-516P-201ENST00000411381 104 ntBASIC2.91□□□□□ -1.94
PTPN4P29074 RPL7P10-201ENST00000417407 739 ntBASIC2.91□□□□□ -1.94
PTPN4P29074 AC005005.2-201ENST00000420779 380 ntBASIC2.91□□□□□ -1.94
PTPN4P29074 AC022018.1-201ENST00000430685 241 ntBASIC2.91□□□□□ -1.94
PTPN4P29074 RPL36AP6-201ENST00000435770 321 ntBASIC2.91□□□□□ -1.94
PTPN4P29074 AC129850.1-201ENST00000436203 508 ntBASIC2.91□□□□□ -1.94
PTPN4P29074 AL008629.1-201ENST00000438615 184 ntBASIC2.91□□□□□ -1.94
PTPN4P29074 Z96811.1-201ENST00000445880 108 ntBASIC2.91□□□□□ -1.94
PTPN4P29074 MTCO1P27-201ENST00000448269 226 ntBASIC2.91□□□□□ -1.94
PTPN4P29074 AL109741.2-201ENST00000455561 343 ntBASIC2.91□□□□□ -1.94
PTPN4P29074 MTND5P4-201ENST00000514978 288 ntBASIC2.91□□□□□ -1.94
PTPN4P29074 SCARNA15.2-201ENST00000516409 127 ntBASIC2.91□□□□□ -1.94
PTPN4P29074 RNU6-826P-201ENST00000516827 104 ntBASIC2.91□□□□□ -1.94
PTPN4P29074 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms