Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 RN7SL93P-201ENST00000463035 293 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 FAM133DP-201ENST00000464802 691 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 AC007182.2-201ENST00000489251 402 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.44□□□□□ -1.86
ABCD3P28288 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ABCD3P28288 SNORD59.2-201ENST00000516873 68 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 RNA5SP290-201ENST00000517133 127 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 RNU1-45P-201ENST00000517191 141 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.44□□□□□ -1.86
ABCD3P28288 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.44□□□□□ -1.86
ABCD3P28288 AC135279.1-201ENST00000543493 504 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 NCAPGP2-201ENST00000557911 754 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.44□□□□□ -1.86
ABCD3P28288 AC074050.1-201ENST00000563247 211 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.44□□□□□ -1.86
ABCD3P28288 AC087683.1-201ENST00000591187 441 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 AC007619.2-201ENST00000605743 379 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 RNU1-30P-201ENST00000606575 163 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 AL365204.3-201ENST00000612448 685 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 AC091834.1-201ENST00000614543 472 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.44□□□□□ -1.86
ABCD3P28288 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.44□□□□□ -1.86
ABCD3P28288 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ABCD3P28288 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ABCD3P28288 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
ABCD3P28288 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
ABCD3P28288 MTND5P29-201ENST00000458676 1807 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.44□□□□□ -1.86
ABCD3P28288 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.43□□□□□ -1.86
ABCD3P28288 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ABCD3P28288 AL359693.1-201ENST00000614959 2407 ntBASIC3.43□□□□□ -1.86
ABCD3P28288 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
ABCD3P28288 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ABCD3P28288 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.43□□□□□ -1.86
ABCD3P28288 RNU6-169P-201ENST00000365336 107 ntBASIC3.43□□□□□ -1.86
ABCD3P28288 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
ABCD3P28288 BTF3L4P3-201ENST00000418879 476 ntBASIC3.43□□□□□ -1.86
ABCD3P28288 RPL23AP82-202ENST00000427528 469 ntBASIC3.43□□□□□ -1.86
ABCD3P28288 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.43□□□□□ -1.86
ABCD3P28288 NEK4P1-201ENST00000433383 879 ntBASIC3.43□□□□□ -1.86
ABCD3P28288 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.43□□□□□ -1.86
ABCD3P28288 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.43□□□□□ -1.86
ABCD3P28288 PRDX3P3-201ENST00000447765 522 ntBASIC3.43□□□□□ -1.86
ABCD3P28288 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.43□□□□□ -1.86
ABCD3P28288 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.43□□□□□ -1.86
ABCD3P28288 AC004924.1-201ENST00000480160 781 ntBASIC3.43□□□□□ -1.86
ABCD3P28288 RN7SKP209-201ENST00000516888 304 ntBASIC3.43□□□□□ -1.86
ABCD3P28288 RNU6-677P-201ENST00000516914 101 ntBASIC3.43□□□□□ -1.86
ABCD3P28288 RN7SKP60-201ENST00000516985 239 ntBASIC3.43□□□□□ -1.86
ABCD3P28288 RNU6-410P-201ENST00000517006 107 ntBASIC3.43□□□□□ -1.86
ABCD3P28288 RANP9-201ENST00000519957 271 ntBASIC3.43□□□□□ -1.86
ABCD3P28288 AC007991.1-201ENST00000522680 631 ntBASIC3.43□□□□□ -1.86
ABCD3P28288 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ABCD3P28288 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.43□□□□□ -1.86
ABCD3P28288 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.43□□□□□ -1.86
ABCD3P28288 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.43□□□□□ -1.86
ABCD3P28288 AL391840.1-201ENST00000571144 367 ntBASIC3.43□□□□□ -1.86
ABCD3P28288 AC136601.2-201ENST00000604356 474 ntBASIC3.43□□□□□ -1.86
ABCD3P28288 AC007363.1-201ENST00000604736 620 ntBASIC3.43□□□□□ -1.86
ABCD3P28288 BRDTP1-201ENST00000605735 677 ntBASIC3.43□□□□□ -1.86
ABCD3P28288 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ABCD3P28288 AC099842.1-201ENST00000619919 596 ntBASIC3.43□□□□□ -1.86
ABCD3P28288 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.43□□□□□ -1.86
ABCD3P28288 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.43□□□□□ -1.86
ABCD3P28288 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ABCD3P28288 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ABCD3P28288 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ABCD3P28288 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ABCD3P28288 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ABCD3P28288 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.42□□□□□ -1.86
ABCD3P28288 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.42□□□□□ -1.86
ABCD3P28288 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ABCD3P28288 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
ABCD3P28288 RNU6-1097P-201ENST00000363586 107 ntBASIC3.42□□□□□ -1.86
ABCD3P28288 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ABCD3P28288 Y_RNA.436-201ENST00000384097 102 ntBASIC3.42□□□□□ -1.86
ABCD3P28288 RNU6-39P-201ENST00000384344 107 ntBASIC3.42□□□□□ -1.86
ABCD3P28288 Y_RNA.559-201ENST00000384686 107 ntBASIC3.42□□□□□ -1.86
ABCD3P28288 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
ABCD3P28288 HMGN2P8-201ENST00000391458 268 ntBASIC3.42□□□□□ -1.86
ABCD3P28288 RNU2-39P-201ENST00000410604 198 ntBASIC3.42□□□□□ -1.86
ABCD3P28288 RNU2-16P-201ENST00000410712 136 ntBASIC3.42□□□□□ -1.86
ABCD3P28288 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.42□□□□□ -1.86
ABCD3P28288 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.42□□□□□ -1.86
ABCD3P28288 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.42□□□□□ -1.86
ABCD3P28288 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.42□□□□□ -1.86
ABCD3P28288 GPR143P-201ENST00000434155 205 ntBASIC3.42□□□□□ -1.86
ABCD3P28288 HIGD1AP11-201ENST00000438361 280 ntBASIC3.42□□□□□ -1.86
ABCD3P28288 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
ABCD3P28288 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.42□□□□□ -1.86
ABCD3P28288 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.42□□□□□ -1.86
ABCD3P28288 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.42□□□□□ -1.86
ABCD3P28288 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.42□□□□□ -1.86
ABCD3P28288 AL136097.1-201ENST00000456945 913 ntBASIC3.42□□□□□ -1.86
ABCD3P28288 RN7SL542P-201ENST00000467147 294 ntBASIC3.42□□□□□ -1.86
ABCD3P28288 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ABCD3P28288 AC117522.1-201ENST00000509821 380 ntBASIC3.42□□□□□ -1.86
ABCD3P28288 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.42□□□□□ -1.86
ABCD3P28288 RNU6-405P-201ENST00000516637 110 ntBASIC3.42□□□□□ -1.86
ABCD3P28288 AC023632.4-201ENST00000517783 191 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms