Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DOBP13765 DDX3P2-201ENST00000446138 111 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 RPS29P31-201ENST00000446147 164 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DOBP13765 RPS3AP46-201ENST00000448352 682 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 FDX1P2-201ENST00000450769 375 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 SNRPGP6-201ENST00000451124 220 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 ANP32BP2-201ENST00000454525 545 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 HMGB3P30-201ENST00000457863 606 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 RNU6-261P-201ENST00000459506 102 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 HMGB1P22-201ENST00000505315 124 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 HMGN1P11-201ENST00000508668 303 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DOBP13765 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DOBP13765 RNU6-1281P-201ENST00000516223 105 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 SNORD27.1-201ENST00000516319 72 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DOBP13765 RANP9-201ENST00000519957 271 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 HMGB1P41-201ENST00000520234 440 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DOBP13765 AP006245.1-201ENST00000522549 120 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HLA-DOBP13765 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.19□□□□□ -1.9
HLA-DOBP13765 ARL2BPP2-201ENST00000550907 489 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DOBP13765 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DOBP13765 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
HLA-DOBP13765 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DOBP13765 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DOBP13765 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DOBP13765 AC010928.3-201ENST00000587712 541 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.19□□□□□ -1.9
HLA-DOBP13765 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DOBP13765 AP000907.4-201ENST00000604143 237 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 AC008536.2-201ENST00000607284 349 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 AC002553.4-201ENST00000616896 331 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 U6.42-201ENST00000618440 107 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DOBP13765 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
HLA-DOBP13765 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DOBP13765 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DOBP13765 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DOBP13765 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DOBP13765 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DOBP13765 CEP170P1-201ENST00000502249 4587 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DOBP13765 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.19□□□□□ -1.9
HLA-DOBP13765 HSPA8P1-201ENST00000425843 1833 ntBASIC3.19□□□□□ -1.9
HLA-DOBP13765 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DOBP13765 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DOBP13765 ZNF285B-201ENST00000561698 1767 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
HLA-DOBP13765 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
HLA-DOBP13765 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DOBP13765 Y_RNA.89-201ENST00000363031 102 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 Y_RNA.126-201ENST00000363382 111 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 RNU6-534P-201ENST00000364877 106 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 Y_RNA.367-201ENST00000365544 101 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 RNU5E-6P-201ENST00000365574 115 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
HLA-DOBP13765 RNU6-1181P-201ENST00000384191 106 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DOBP13765 AL359634.1-202ENST00000404721 284 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 U3.39-201ENST00000408569 239 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 RNU2-9P-201ENST00000410194 145 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 RNU2-36P-201ENST00000410361 191 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 ATP5A1P2-201ENST00000412323 255 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 USP9YP6-201ENST00000413550 854 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 AC017079.2-201ENST00000416102 485 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DOBP13765 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DOBP13765 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DOBP13765 USP12PX-201ENST00000432383 1057 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 RPL36AP6-201ENST00000435770 321 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 USP9YP7-201ENST00000436723 430 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DOBP13765 RPS15AP9-201ENST00000439856 381 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 AL353572.1-201ENST00000442490 417 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DOBP13765 AL359073.1-201ENST00000448036 403 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DOBP13765 USP9YP32-201ENST00000452432 430 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 RPS24P6-201ENST00000452670 400 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 AL356010.1-201ENST00000456364 102 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 RNU6-420P-201ENST00000458780 107 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 AC010285.1-201ENST00000470580 392 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.18□□□□□ -1.9
HLA-DOBP13765 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DOBP13765 AC106872.2-201ENST00000494303 480 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 FCF1P3-201ENST00000496394 590 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DOBP13765 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DOBP13765 RNU6-579P-201ENST00000516879 102 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DOBP13765 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DOBP13765 OR5BN1P-201ENST00000532955 829 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DOBP13765 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DOBP13765 AF038458.1-201ENST00000588406 262 ntBASIC3.18□□□□□ -1.9
HLA-DOBP13765 AC006116.10-201ENST00000591836 581 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms