Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDH1P12830 MRPS10P2-201ENST00000431226 381 ntBASIC3.33□□□□□ -1.88
CDH1P12830 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDH1P12830 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH1P12830 USP9YP15-201ENST00000442391 422 ntBASIC3.33□□□□□ -1.88
CDH1P12830 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH1P12830 AL136380.1-201ENST00000447970 162 ntBASIC3.33□□□□□ -1.88
CDH1P12830 Z99127.3-201ENST00000448158 395 ntBASIC3.33□□□□□ -1.88
CDH1P12830 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDH1P12830 AC125238.1-201ENST00000448842 249 ntBASIC3.33□□□□□ -1.88
CDH1P12830 AC007967.1-201ENST00000455422 1159 ntBASIC3.33□□□□□ -1.88
CDH1P12830 AC013267.1-201ENST00000458227 267 ntBASIC3.33□□□□□ -1.88
CDH1P12830 MTCO2P29-201ENST00000465212 189 ntBASIC3.33□□□□□ -1.88
CDH1P12830 AC019235.1-201ENST00000503847 207 ntBASIC3.33□□□□□ -1.88
CDH1P12830 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.33□□□□□ -1.88
CDH1P12830 RNU6-718P-201ENST00000516166 105 ntBASIC3.33□□□□□ -1.88
CDH1P12830 RNU6-445P-201ENST00000516949 107 ntBASIC3.33□□□□□ -1.88
CDH1P12830 AP001893.2-201ENST00000526949 202 ntBASIC3.33□□□□□ -1.88
CDH1P12830 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.33□□□□□ -1.88
CDH1P12830 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.33□□□□□ -1.88
CDH1P12830 AC067852.3-201ENST00000589177 561 ntBASIC3.33□□□□□ -1.88
CDH1P12830 KC877982.1-201ENST00000602313 470 ntBASIC3.33□□□□□ -1.88
CDH1P12830 AP001429.1-201ENST00000602568 530 ntBASIC3.33□□□□□ -1.88
CDH1P12830 AL391646.1-201ENST00000603860 190 ntBASIC3.33□□□□□ -1.88
CDH1P12830 AC245389.1-201ENST00000605141 529 ntBASIC3.33□□□□□ -1.88
CDH1P12830 HMGN2P28-201ENST00000606102 262 ntBASIC3.33□□□□□ -1.88
CDH1P12830 AC090970.3-201ENST00000612566 866 ntBASIC3.33□□□□□ -1.88
CDH1P12830 uc_338.12-201ENST00000616344 181 ntBASIC3.33□□□□□ -1.88
CDH1P12830 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.33□□□□□ -1.88
CDH1P12830 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.33□□□□□ -1.88
CDH1P12830 LRRC77P-213ENST00000637727 880 ntBASIC3.33□□□□□ -1.88
CDH1P12830 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CDH1P12830 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.33□□□□□ -1.88
CDH1P12830 ELF2P3-201ENST00000445099 1506 ntBASIC3.33□□□□□ -1.88
CDH1P12830 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.33□□□□□ -1.88
CDH1P12830 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CDH1P12830 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.32□□□□□ -1.88
CDH1P12830 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDH1P12830 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDH1P12830 RNU4-35P-201ENST00000362588 141 ntBASIC3.32□□□□□ -1.88
CDH1P12830 RNU5A-8P-201ENST00000364102 114 ntBASIC3.32□□□□□ -1.88
CDH1P12830 RNU6-1078P-201ENST00000364522 103 ntBASIC3.32□□□□□ -1.88
CDH1P12830 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
CDH1P12830 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CDH1P12830 SNORD17-201ENST00000390930 237 ntBASIC3.32□□□□□ -1.88
CDH1P12830 RNU6-837P-201ENST00000391056 108 ntBASIC3.32□□□□□ -1.88
CDH1P12830 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.32□□□□□ -1.88
CDH1P12830 RNU6-712P-201ENST00000410558 100 ntBASIC3.32□□□□□ -1.88
CDH1P12830 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH1P12830 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH1P12830 RPS7P15-201ENST00000415804 584 ntBASIC3.32□□□□□ -1.88
CDH1P12830 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH1P12830 MTCO2P19-201ENST00000427513 598 ntBASIC3.32□□□□□ -1.88
CDH1P12830 RPL23AP82-202ENST00000427528 469 ntBASIC3.32□□□□□ -1.88
CDH1P12830 OR4K11P-201ENST00000431829 904 ntBASIC3.32□□□□□ -1.88
CDH1P12830 FCF1P1-201ENST00000432690 571 ntBASIC3.32□□□□□ -1.88
CDH1P12830 SETP5-201ENST00000437270 562 ntBASIC3.32□□□□□ -1.88
CDH1P12830 RBMX2P4-201ENST00000441256 376 ntBASIC3.32□□□□□ -1.88
CDH1P12830 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH1P12830 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH1P12830 HMGN1P18-201ENST00000457642 277 ntBASIC3.32□□□□□ -1.88
CDH1P12830 CENPBD1P1-201ENST00000464061 469 ntBASIC3.32□□□□□ -1.88
CDH1P12830 AL121769.1-201ENST00000469473 401 ntBASIC3.32□□□□□ -1.88
CDH1P12830 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH1P12830 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH1P12830 ARL4AP2-201ENST00000507378 601 ntBASIC3.32□□□□□ -1.88
CDH1P12830 RNU6-1095P-201ENST00000516148 108 ntBASIC3.32□□□□□ -1.88
CDH1P12830 RNU6-798P-201ENST00000516912 103 ntBASIC3.32□□□□□ -1.88
CDH1P12830 RNA5SP337-201ENST00000517007 109 ntBASIC3.32□□□□□ -1.88
CDH1P12830 RNU6-1220P-201ENST00000517126 108 ntBASIC3.32□□□□□ -1.88
CDH1P12830 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH1P12830 AC134698.4-201ENST00000523451 826 ntBASIC3.32□□□□□ -1.88
CDH1P12830 AC022616.3-201ENST00000523940 148 ntBASIC3.32□□□□□ -1.88
CDH1P12830 OR4R3P-201ENST00000525084 838 ntBASIC3.32□□□□□ -1.88
CDH1P12830 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH1P12830 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.32□□□□□ -1.88
CDH1P12830 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH1P12830 TRAV37-201ENST00000553906 342 ntBASIC3.32□□□□□ -1.88
CDH1P12830 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.32□□□□□ -1.88
CDH1P12830 OR4K8P-201ENST00000578842 1048 ntBASIC3.32□□□□□ -1.88
CDH1P12830 COX6CP3-201ENST00000580869 223 ntBASIC3.32□□□□□ -1.88
CDH1P12830 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.32□□□□□ -1.88
CDH1P12830 AL031176.1-201ENST00000604554 466 ntBASIC3.32□□□□□ -1.88
CDH1P12830 SNORA51-201ENST00000606420 132 ntBASIC3.32□□□□□ -1.88
CDH1P12830 U3.45-201ENST00000607547 219 ntBASIC3.32□□□□□ -1.88
CDH1P12830 AC007038.2-201ENST00000608095 740 ntBASIC3.32□□□□□ -1.88
CDH1P12830 AC245517.5-201ENST00000611529 162 ntBASIC3.32□□□□□ -1.88
CDH1P12830 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
CDH1P12830 AC244258.1-201ENST00000637553 1071 ntBASIC3.32□□□□□ -1.88
CDH1P12830 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDH1P12830 AC032011.1-201ENST00000611703 1549 ntBASIC3.32□□□□□ -1.88
CDH1P12830 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
CDH1P12830 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
CDH1P12830 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CDH1P12830 AC007496.3-201ENST00000624987 3443 ntBASIC3.32□□□□□ -1.88
CDH1P12830 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CDH1P12830 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDH1P12830 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CDH1P12830 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CDH1P12830 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms