Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 MIR5571-201ENST00000577998 113 ntBASIC2.39□□□□□ -2.03
TPM1P09493 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.39□□□□□ -2.03
TPM1P09493 AC009090.3-201ENST00000616553 565 ntBASIC2.39□□□□□ -2.03
TPM1P09493 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
TPM1P09493 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.39□□□□□ -2.03
TPM1P09493 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.38□□□□□ -2.03
TPM1P09493 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
TPM1P09493 HMGB1P5-201ENST00000255320 642 ntBASIC2.38□□□□□ -2.03
TPM1P09493 FAM133CP-201ENST00000332869 704 ntBASIC2.38□□□□□ -2.03
TPM1P09493 SNORA48.2-201ENST00000390926 124 ntBASIC2.38□□□□□ -2.03
TPM1P09493 RNU6-750P-201ENST00000390946 107 ntBASIC2.38□□□□□ -2.03
TPM1P09493 RNU2-49P-201ENST00000410666 184 ntBASIC2.38□□□□□ -2.03
TPM1P09493 MTATP6P27-201ENST00000416987 621 ntBASIC2.38□□□□□ -2.03
TPM1P09493 NPM1P11-201ENST00000417106 855 ntBASIC2.38□□□□□ -2.03
TPM1P09493 ZNF863P-201ENST00000426746 417 ntBASIC2.38□□□□□ -2.03
TPM1P09493 AL451062.2-201ENST00000427515 271 ntBASIC2.38□□□□□ -2.03
TPM1P09493 HMGB1P9-201ENST00000429856 646 ntBASIC2.38□□□□□ -2.03
TPM1P09493 AC018634.1-201ENST00000437554 401 ntBASIC2.38□□□□□ -2.03
TPM1P09493 AC092393.1-201ENST00000439625 742 ntBASIC2.38□□□□□ -2.03
TPM1P09493 AL021397.1-201ENST00000451806 248 ntBASIC2.38□□□□□ -2.03
TPM1P09493 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.38□□□□□ -2.03
TPM1P09493 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.38□□□□□ -2.03
TPM1P09493 RPS3P1-201ENST00000456781 192 ntBASIC2.38□□□□□ -2.03
TPM1P09493 AC022447.3-201ENST00000506865 495 ntBASIC2.38□□□□□ -2.03
TPM1P09493 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.38□□□□□ -2.03
TPM1P09493 AC008413.1-201ENST00000511864 177 ntBASIC2.38□□□□□ -2.03
TPM1P09493 RNA5SP200-201ENST00000516360 103 ntBASIC2.38□□□□□ -2.03
TPM1P09493 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.38□□□□□ -2.03
TPM1P09493 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.38□□□□□ -2.03
TPM1P09493 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.38□□□□□ -2.03
TPM1P09493 ZNF971P-201ENST00000562068 1249 ntBASIC2.38□□□□□ -2.03
TPM1P09493 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.38□□□□□ -2.03
TPM1P09493 AC124283.4-201ENST00000581815 456 ntBASIC2.38□□□□□ -2.03
TPM1P09493 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.38□□□□□ -2.03
TPM1P09493 AC025588.2-201ENST00000604851 466 ntBASIC2.38□□□□□ -2.03
TPM1P09493 ZNF658B-202ENST00000615961 3375 ntBASIC2.38□□□□□ -2.03
TPM1P09493 CTSLP2-204ENST00000629029 392 ntBASIC2.38□□□□□ -2.03
TPM1P09493 AC093591.3-201ENST00000634516 308 ntBASIC2.38□□□□□ -2.03
TPM1P09493 ZNF833P-201ENST00000424938 1494 ntBASIC2.38□□□□□ -2.03
TPM1P09493 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.38□□□□□ -2.03
TPM1P09493 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.37□□□□□ -2.03
TPM1P09493 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.37□□□□□ -2.03
TPM1P09493 MTND4P21-201ENST00000453886 1357 ntBASIC2.37□□□□□ -2.03
TPM1P09493 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.37□□□□□ -2.03
TPM1P09493 KPNA2P1-201ENST00000458289 1591 ntBASIC2.37□□□□□ -2.03
TPM1P09493 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
TPM1P09493 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.37□□□□□ -2.03
TPM1P09493 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.37□□□□□ -2.03
TPM1P09493 MIR506-201ENST00000384998 124 ntBASIC2.37□□□□□ -2.03
TPM1P09493 MIR221-201ENST00000385135 110 ntBASIC2.37□□□□□ -2.03
TPM1P09493 RNU2-40P-201ENST00000410833 196 ntBASIC2.37□□□□□ -2.03
TPM1P09493 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.37□□□□□ -2.03
TPM1P09493 AC008850.1-201ENST00000427546 362 ntBASIC2.37□□□□□ -2.03
TPM1P09493 AC236972.1-201ENST00000433225 199 ntBASIC2.37□□□□□ -2.03
TPM1P09493 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.37□□□□□ -2.03
TPM1P09493 AL109933.2-201ENST00000452651 260 ntBASIC2.37□□□□□ -2.03
TPM1P09493 RPS27P21-201ENST00000486977 252 ntBASIC2.37□□□□□ -2.03
TPM1P09493 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.37□□□□□ -2.03
TPM1P09493 RNA5SP356-201ENST00000515972 94 ntBASIC2.37□□□□□ -2.03
TPM1P09493 MIR514B-201ENST00000516774 80 ntBASIC2.37□□□□□ -2.03
TPM1P09493 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.37□□□□□ -2.03
TPM1P09493 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.37□□□□□ -2.03
TPM1P09493 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.37□□□□□ -2.03
TPM1P09493 AL035411.2-201ENST00000604022 421 ntBASIC2.37□□□□□ -2.03
TPM1P09493 MTND4LP5-201ENST00000605152 292 ntBASIC2.37□□□□□ -2.03
TPM1P09493 AP000238.1-201ENST00000608759 426 ntBASIC2.37□□□□□ -2.03
TPM1P09493 AL031601.2-202ENST00000622650 282 ntBASIC2.37□□□□□ -2.03
TPM1P09493 DUXAP9-208ENST00000622815 614 ntBASIC2.37□□□□□ -2.03
TPM1P09493 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.37□□□□□ -2.03
TPM1P09493 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
TPM1P09493 AL359851.1-201ENST00000569460 4997 ntBASIC2.37□□□□□ -2.03
TPM1P09493 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.37□□□□□ -2.03
TPM1P09493 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
TPM1P09493 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
TPM1P09493 FTLP6-201ENST00000355274 422 ntBASIC2.36□□□□□ -2.03
TPM1P09493 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
TPM1P09493 RNU6-1083P-201ENST00000384022 107 ntBASIC2.36□□□□□ -2.03
TPM1P09493 HMGB1P11-201ENST00000413899 637 ntBASIC2.36□□□□□ -2.03
TPM1P09493 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.36□□□□□ -2.03
TPM1P09493 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.36□□□□□ -2.03
TPM1P09493 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.36□□□□□ -2.03
TPM1P09493 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.36□□□□□ -2.03
TPM1P09493 RPL23AP7-203ENST00000449021 469 ntBASIC2.36□□□□□ -2.03
TPM1P09493 MTND2P3-201ENST00000452458 470 ntBASIC2.36□□□□□ -2.03
TPM1P09493 OFD1P3Y-201ENST00000453312 783 ntBASIC2.36□□□□□ -2.03
TPM1P09493 DYNLL1P5-201ENST00000467158 270 ntBASIC2.36□□□□□ -2.03
TPM1P09493 RPS15AP17-201ENST00000470598 390 ntBASIC2.36□□□□□ -2.03
TPM1P09493 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC2.36□□□□□ -2.03
TPM1P09493 RPL23AP49-201ENST00000492925 468 ntBASIC2.36□□□□□ -2.03
TPM1P09493 AC098591.2-201ENST00000510152 315 ntBASIC2.36□□□□□ -2.03
TPM1P09493 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.36□□□□□ -2.03
TPM1P09493 RNA5SP364-201ENST00000516938 78 ntBASIC2.36□□□□□ -2.03
TPM1P09493 RNA5SP291-201ENST00000517222 105 ntBASIC2.36□□□□□ -2.03
TPM1P09493 AC010186.2-204ENST00000537668 439 ntBASIC2.36□□□□□ -2.03
TPM1P09493 MIR3935-201ENST00000583472 104 ntBASIC2.36□□□□□ -2.03
TPM1P09493 AL450336.1-201ENST00000605180 586 ntBASIC2.36□□□□□ -2.03
TPM1P09493 FTX_3.1-201ENST00000610451 147 ntBASIC2.36□□□□□ -2.03
TPM1P09493 AL596245.1-201ENST00000618994 362 ntBASIC2.36□□□□□ -2.03
TPM1P09493 uc_338.20-201ENST00000621563 178 ntBASIC2.36□□□□□ -2.03
TPM1P09493 AC006386.2-201ENST00000624491 75 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms