Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.66□□□□□ -1.82
MMP3P08254 RNU6-780P-201ENST00000391030 104 ntBASIC3.66□□□□□ -1.82
MMP3P08254 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
MMP3P08254 RPL23AP32-201ENST00000395315 459 ntBASIC3.66□□□□□ -1.82
MMP3P08254 GSTA9P-201ENST00000406231 611 ntBASIC3.66□□□□□ -1.82
MMP3P08254 AC126124.2-201ENST00000413542 321 ntBASIC3.66□□□□□ -1.82
MMP3P08254 SSXP9-201ENST00000417503 292 ntBASIC3.66□□□□□ -1.82
MMP3P08254 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.66□□□□□ -1.82
MMP3P08254 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.66□□□□□ -1.82
MMP3P08254 AC233728.2-201ENST00000425348 757 ntBASIC3.66□□□□□ -1.82
MMP3P08254 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.66□□□□□ -1.82
MMP3P08254 MTCO3P30-201ENST00000426425 670 ntBASIC3.66□□□□□ -1.82
MMP3P08254 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.66□□□□□ -1.82
MMP3P08254 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.66□□□□□ -1.82
MMP3P08254 AL353705.1-201ENST00000433468 480 ntBASIC3.66□□□□□ -1.82
MMP3P08254 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.66□□□□□ -1.82
MMP3P08254 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.66□□□□□ -1.82
MMP3P08254 C1DP4-201ENST00000455429 424 ntBASIC3.66□□□□□ -1.82
MMP3P08254 RPS4XP2-201ENST00000458402 793 ntBASIC3.66□□□□□ -1.82
MMP3P08254 RN7SL863P-201ENST00000462370 296 ntBASIC3.66□□□□□ -1.82
MMP3P08254 RPL9P32-201ENST00000464118 620 ntBASIC3.66□□□□□ -1.82
MMP3P08254 UBE2DNL-203ENST00000474922 222 ntBASIC3.66□□□□□ -1.82
MMP3P08254 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.66□□□□□ -1.82
MMP3P08254 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.66□□□□□ -1.82
MMP3P08254 Vault.1-201ENST00000516474 102 ntBASIC3.66□□□□□ -1.82
MMP3P08254 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.66□□□□□ -1.82
MMP3P08254 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.66□□□□□ -1.82
MMP3P08254 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.66□□□□□ -1.82
MMP3P08254 AC124947.2-202ENST00000552735 133 ntBASIC3.66□□□□□ -1.82
MMP3P08254 AC136619.2-201ENST00000563361 631 ntBASIC3.66□□□□□ -1.82
MMP3P08254 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.66□□□□□ -1.82
MMP3P08254 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.66□□□□□ -1.82
MMP3P08254 AC015917.1-201ENST00000579654 510 ntBASIC3.66□□□□□ -1.82
MMP3P08254 LARP7P3-201ENST00000579888 337 ntBASIC3.66□□□□□ -1.82
MMP3P08254 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.66□□□□□ -1.82
MMP3P08254 MIR3146-201ENST00000580367 79 ntBASIC3.66□□□□□ -1.82
MMP3P08254 RNA5SP108-201ENST00000605921 117 ntBASIC3.66□□□□□ -1.82
MMP3P08254 AC012531.5-201ENST00000611375 151 ntBASIC3.66□□□□□ -1.82
MMP3P08254 AC006338.1-201ENST00000618453 749 ntBASIC3.66□□□□□ -1.82
MMP3P08254 AL356585.4-201ENST00000623078 1229 ntBASIC3.66□□□□□ -1.82
MMP3P08254 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.66□□□□□ -1.82
MMP3P08254 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.66□□□□□ -1.82
MMP3P08254 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
MMP3P08254 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
MMP3P08254 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
MMP3P08254 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
MMP3P08254 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
MMP3P08254 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
MMP3P08254 AL365361.1-201ENST00000566942 3481 ntBASIC3.65□□□□□ -1.83
MMP3P08254 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
MMP3P08254 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
MMP3P08254 RNU6-1078P-201ENST00000364522 103 ntBASIC3.65□□□□□ -1.83
MMP3P08254 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.65□□□□□ -1.83
MMP3P08254 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.65□□□□□ -1.83
MMP3P08254 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.65□□□□□ -1.83
MMP3P08254 FCF1P1-201ENST00000432690 571 ntBASIC3.65□□□□□ -1.83
MMP3P08254 AC119618.1-201ENST00000434191 222 ntBASIC3.65□□□□□ -1.83
MMP3P08254 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.65□□□□□ -1.83
MMP3P08254 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.65□□□□□ -1.83
MMP3P08254 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.65□□□□□ -1.83
MMP3P08254 CEACAMP4-201ENST00000457676 421 ntBASIC3.65□□□□□ -1.83
MMP3P08254 AP000873.1-201ENST00000463987 400 ntBASIC3.65□□□□□ -1.83
MMP3P08254 RPL23AP67-201ENST00000465341 474 ntBASIC3.65□□□□□ -1.83
MMP3P08254 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
MMP3P08254 NIPA2P2-201ENST00000496376 1083 ntBASIC3.65□□□□□ -1.83
MMP3P08254 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
MMP3P08254 AC021146.1-201ENST00000511202 716 ntBASIC3.65□□□□□ -1.83
MMP3P08254 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.65□□□□□ -1.83
MMP3P08254 FAM92A1P1-201ENST00000528023 890 ntBASIC3.65□□□□□ -1.83
MMP3P08254 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.65□□□□□ -1.83
MMP3P08254 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.65□□□□□ -1.83
MMP3P08254 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.65□□□□□ -1.83
MMP3P08254 AL451007.1-201ENST00000595491 289 ntBASIC3.65□□□□□ -1.83
MMP3P08254 AP001429.1-201ENST00000602568 530 ntBASIC3.65□□□□□ -1.83
MMP3P08254 IGHV3-29-201ENST00000604817 344 ntBASIC3.65□□□□□ -1.83
MMP3P08254 AL136363.1-201ENST00000605349 337 ntBASIC3.65□□□□□ -1.83
MMP3P08254 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.65□□□□□ -1.83
MMP3P08254 AL158211.4-201ENST00000606988 584 ntBASIC3.65□□□□□ -1.83
MMP3P08254 AC092954.2-201ENST00000609103 430 ntBASIC3.65□□□□□ -1.83
MMP3P08254 RNVU1-4-201ENST00000612985 164 ntBASIC3.65□□□□□ -1.83
MMP3P08254 AL157817.1-201ENST00000614264 790 ntBASIC3.65□□□□□ -1.83
MMP3P08254 U6atac.1-201ENST00000616025 117 ntBASIC3.65□□□□□ -1.83
MMP3P08254 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.65□□□□□ -1.83
MMP3P08254 AC006386.2-201ENST00000624491 75 ntBASIC3.65□□□□□ -1.83
MMP3P08254 AC012005.1-201ENST00000624575 75 ntBASIC3.65□□□□□ -1.83
MMP3P08254 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
MMP3P08254 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
MMP3P08254 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
MMP3P08254 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
MMP3P08254 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
MMP3P08254 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.65□□□□□ -1.83
MMP3P08254 AC058791.1-201ENST00000608412 3198 ntBASIC3.65□□□□□ -1.83
MMP3P08254 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.64□□□□□ -1.83
MMP3P08254 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
MMP3P08254 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
MMP3P08254 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
MMP3P08254 USP8P1-201ENST00000494673 3183 ntBASIC3.64□□□□□ -1.83
MMP3P08254 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
MMP3P08254 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.64□□□□□ -1.83
MMP3P08254 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms