Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.38□□□□□ -1.87
SRPRAP08240 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SRPRAP08240 AL033528.1-201ENST00000453780 140 ntBASIC3.38□□□□□ -1.87
SRPRAP08240 RNA5SP310-201ENST00000459084 116 ntBASIC3.38□□□□□ -1.87
SRPRAP08240 snoU109.1-201ENST00000459339 135 ntBASIC3.38□□□□□ -1.87
SRPRAP08240 MTND1P3-201ENST00000484956 952 ntBASIC3.38□□□□□ -1.87
SRPRAP08240 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.38□□□□□ -1.87
SRPRAP08240 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.38□□□□□ -1.87
SRPRAP08240 CDC42P4-201ENST00000510507 563 ntBASIC3.38□□□□□ -1.87
SRPRAP08240 Y_RNA.672-201ENST00000516289 104 ntBASIC3.38□□□□□ -1.87
SRPRAP08240 SNORA74D-201ENST00000516404 141 ntBASIC3.38□□□□□ -1.87
SRPRAP08240 RN7SKP57-201ENST00000517248 293 ntBASIC3.38□□□□□ -1.87
SRPRAP08240 AC107934.2-201ENST00000518653 310 ntBASIC3.38□□□□□ -1.87
SRPRAP08240 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.38□□□□□ -1.87
SRPRAP08240 AC022690.1-201ENST00000526681 550 ntBASIC3.38□□□□□ -1.87
SRPRAP08240 AP000873.5-201ENST00000533906 236 ntBASIC3.38□□□□□ -1.87
SRPRAP08240 AC005476.1-201ENST00000554427 397 ntBASIC3.38□□□□□ -1.87
SRPRAP08240 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.38□□□□□ -1.87
SRPRAP08240 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.38□□□□□ -1.87
SRPRAP08240 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.38□□□□□ -1.87
SRPRAP08240 AC015917.1-201ENST00000579654 510 ntBASIC3.38□□□□□ -1.87
SRPRAP08240 RSL24D1P11-201ENST00000591045 491 ntBASIC3.38□□□□□ -1.87
SRPRAP08240 AP000860.1-201ENST00000605250 559 ntBASIC3.38□□□□□ -1.87
SRPRAP08240 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.38□□□□□ -1.87
SRPRAP08240 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.38□□□□□ -1.87
SRPRAP08240 AC009090.3-201ENST00000616553 565 ntBASIC3.38□□□□□ -1.87
SRPRAP08240 SNHG22-203ENST00000617833 660 ntBASIC3.38□□□□□ -1.87
SRPRAP08240 AC006338.1-201ENST00000618453 749 ntBASIC3.38□□□□□ -1.87
SRPRAP08240 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.38□□□□□ -1.87
SRPRAP08240 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.38□□□□□ -1.87
SRPRAP08240 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SRPRAP08240 GNG5P1-201ENST00000255500 204 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 OR1S2-201ENST00000302592 978 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 RNU6-297P-201ENST00000384636 107 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 Y_RNA.553-201ENST00000384670 102 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 AL359634.1-202ENST00000404721 284 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 RNU2-62P-201ENST00000410868 191 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 RNU4-47P-201ENST00000410876 114 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 RNU6-55P-201ENST00000411092 107 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 RNU6-954P-201ENST00000411355 107 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 AC006366.1-201ENST00000422002 759 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.37□□□□□ -1.87
SRPRAP08240 USP12PX-201ENST00000432383 1057 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.37□□□□□ -1.87
SRPRAP08240 ATP5C1P1-201ENST00000441945 895 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 USP9YP29-201ENST00000445112 563 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 Z75741.1-201ENST00000446793 314 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 AC140076.1-201ENST00000449897 361 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 MTND1P12-201ENST00000455231 147 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 RPS4XP2-201ENST00000458402 793 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 SNORD42A-201ENST00000459584 64 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 RPS20P20-201ENST00000460498 340 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 RPS27AP1-201ENST00000475545 471 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 FCF1P3-201ENST00000496394 590 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.37□□□□□ -1.87
SRPRAP08240 RPL12P22-201ENST00000519073 490 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.37□□□□□ -1.87
SRPRAP08240 AC100870.1-201ENST00000522035 505 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 AC004024.1-201ENST00000549244 247 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 HIGD1AP1-201ENST00000550979 275 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 AC124947.2-202ENST00000552735 133 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.37□□□□□ -1.87
SRPRAP08240 AC037471.2-201ENST00000564941 598 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.37□□□□□ -1.87
SRPRAP08240 AC087752.4-201ENST00000605911 462 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 RN7SKP299-201ENST00000606679 301 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 AC009570.1-201ENST00000609599 745 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 AC048344.4-201ENST00000619744 527 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 SNORD39.4-201ENST00000620099 78 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 PLCE1P1-201ENST00000622094 305 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 AC090582.1-201ENST00000636321 199 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 AP003399.1-201ENST00000637534 361 ntBASIC3.37□□□□□ -1.87
SRPRAP08240 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
SRPRAP08240 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SRPRAP08240 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SRPRAP08240 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SRPRAP08240 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.37□□□□□ -1.87
SRPRAP08240 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SRPRAP08240 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.36□□□□□ -1.87
SRPRAP08240 TEX21P-201ENST00000447107 1476 ntBASIC3.36□□□□□ -1.87
SRPRAP08240 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
SRPRAP08240 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.36□□□□□ -1.87
SRPRAP08240 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
SRPRAP08240 MIR591-201ENST00000385290 95 ntBASIC3.36□□□□□ -1.87
SRPRAP08240 RNU6-1197P-201ENST00000391183 107 ntBASIC3.36□□□□□ -1.87
SRPRAP08240 RN7SKP140-201ENST00000411196 284 ntBASIC3.36□□□□□ -1.87
SRPRAP08240 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.36□□□□□ -1.87
SRPRAP08240 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.36□□□□□ -1.87
SRPRAP08240 AL589872.1-201ENST00000426602 288 ntBASIC3.36□□□□□ -1.87
SRPRAP08240 AL590383.1-201ENST00000428602 75 ntBASIC3.36□□□□□ -1.87
SRPRAP08240 NEK4P1-201ENST00000433383 879 ntBASIC3.36□□□□□ -1.87
SRPRAP08240 AC119618.1-201ENST00000434191 222 ntBASIC3.36□□□□□ -1.87
SRPRAP08240 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.36□□□□□ -1.87
SRPRAP08240 MTCO1P19-201ENST00000443487 500 ntBASIC3.36□□□□□ -1.87
SRPRAP08240 GAPDHP27-201ENST00000447427 1020 ntBASIC3.36□□□□□ -1.87
SRPRAP08240 RN7SL330P-201ENST00000469709 307 ntBASIC3.36□□□□□ -1.87
SRPRAP08240 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.36□□□□□ -1.87
SRPRAP08240 AC010587.1-201ENST00000505809 469 ntBASIC3.36□□□□□ -1.87
SRPRAP08240 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.36□□□□□ -1.87
SRPRAP08240 TTC39CP1-201ENST00000512513 755 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms