Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
APOEP02649 AC023824.2-201ENST00000566185 400 ntBASIC2.12□□□□□ -2.07
APOEP02649 AC135628.1-201ENST00000568867 534 ntBASIC2.12□□□□□ -2.07
APOEP02649 LARP7P2-201ENST00000575306 125 ntBASIC2.12□□□□□ -2.07
APOEP02649 OR4K7P-201ENST00000580232 945 ntBASIC2.12□□□□□ -2.07
APOEP02649 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.12□□□□□ -2.07
APOEP02649 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.12□□□□□ -2.07
APOEP02649 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.12□□□□□ -2.07
APOEP02649 AC103710.1-201ENST00000610003 901 ntBASIC2.12□□□□□ -2.07
APOEP02649 AC093838.1-201ENST00000613014 469 ntBASIC2.12□□□□□ -2.07
APOEP02649 AC132825.7-201ENST00000638744 335 ntBASIC2.12□□□□□ -2.07
APOEP02649 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.12□□□□□ -2.07
APOEP02649 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.12□□□□□ -2.07
APOEP02649 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
APOEP02649 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
APOEP02649 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.11□□□□□ -2.07
APOEP02649 SNORD23.1-201ENST00000408212 104 ntBASIC2.11□□□□□ -2.07
APOEP02649 MIR1290-201ENST00000408735 78 ntBASIC2.11□□□□□ -2.07
APOEP02649 Z85995.1-201ENST00000415547 335 ntBASIC2.11□□□□□ -2.07
APOEP02649 SPA17P1-201ENST00000416656 452 ntBASIC2.11□□□□□ -2.07
APOEP02649 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.11□□□□□ -2.07
APOEP02649 AL512637.2-201ENST00000431287 1256 ntBASIC2.11□□□□□ -2.07
APOEP02649 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.11□□□□□ -2.07
APOEP02649 AL445646.1-201ENST00000431784 216 ntBASIC2.11□□□□□ -2.07
APOEP02649 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
APOEP02649 AC090453.1-201ENST00000495560 436 ntBASIC2.11□□□□□ -2.07
APOEP02649 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.11□□□□□ -2.07
APOEP02649 SCARNA17.1-201ENST00000516211 143 ntBASIC2.11□□□□□ -2.07
APOEP02649 SCARNA17.2-201ENST00000516334 143 ntBASIC2.11□□□□□ -2.07
APOEP02649 CYCSP26-201ENST00000534107 320 ntBASIC2.11□□□□□ -2.07
APOEP02649 ANP32BP3-201ENST00000559213 706 ntBASIC2.11□□□□□ -2.07
APOEP02649 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.11□□□□□ -2.07
APOEP02649 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.11□□□□□ -2.07
APOEP02649 AC008749.1-201ENST00000597650 306 ntBASIC2.11□□□□□ -2.07
APOEP02649 AC133794.1-201ENST00000602731 914 ntBASIC2.11□□□□□ -2.07
APOEP02649 AC009314.1-201ENST00000603871 304 ntBASIC2.11□□□□□ -2.07
APOEP02649 AL450270.1-201ENST00000606160 391 ntBASIC2.11□□□□□ -2.07
APOEP02649 SNORD14A-201ENST00000606526 91 ntBASIC2.11□□□□□ -2.07
APOEP02649 AC092954.1-201ENST00000609121 445 ntBASIC2.11□□□□□ -2.07
APOEP02649 Y_RNA.783-201ENST00000613546 102 ntBASIC2.11□□□□□ -2.07
APOEP02649 SCARNA17.4-201ENST00000614296 143 ntBASIC2.11□□□□□ -2.07
APOEP02649 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
APOEP02649 FAM133CP-201ENST00000332869 704 ntBASIC2.1□□□□□ -2.07
APOEP02649 RNA5SP138-201ENST00000365098 114 ntBASIC2.1□□□□□ -2.07
APOEP02649 SNORD65C-201ENST00000390962 71 ntBASIC2.1□□□□□ -2.07
APOEP02649 AL139156.1-201ENST00000412785 841 ntBASIC2.1□□□□□ -2.07
APOEP02649 AL136133.1-201ENST00000413694 376 ntBASIC2.1□□□□□ -2.07
APOEP02649 AL445183.3-201ENST00000414168 502 ntBASIC2.1□□□□□ -2.07
APOEP02649 BEND7P1-201ENST00000422058 457 ntBASIC2.1□□□□□ -2.07
APOEP02649 VN1R42P-201ENST00000424651 344 ntBASIC2.1□□□□□ -2.07
APOEP02649 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
APOEP02649 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.1□□□□□ -2.07
APOEP02649 HMGB3P12-201ENST00000438745 556 ntBASIC2.1□□□□□ -2.07
APOEP02649 RNFT1P2-201ENST00000443064 757 ntBASIC2.1□□□□□ -2.07
APOEP02649 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.1□□□□□ -2.07
APOEP02649 PSPHP1-201ENST00000450062 261 ntBASIC2.1□□□□□ -2.07
APOEP02649 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.1□□□□□ -2.07
APOEP02649 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.1□□□□□ -2.07
APOEP02649 AC106872.3-201ENST00000495104 446 ntBASIC2.1□□□□□ -2.07
APOEP02649 RPL38P4-201ENST00000502376 214 ntBASIC2.1□□□□□ -2.07
APOEP02649 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.1□□□□□ -2.07
APOEP02649 SNORA31.18-201ENST00000517043 134 ntBASIC2.1□□□□□ -2.07
APOEP02649 BTF3P12-201ENST00000519620 469 ntBASIC2.1□□□□□ -2.07
APOEP02649 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.1□□□□□ -2.07
APOEP02649 AC008127.2-201ENST00000549925 1075 ntBASIC2.1□□□□□ -2.07
APOEP02649 YWHAZP1-201ENST00000556286 722 ntBASIC2.1□□□□□ -2.07
APOEP02649 AC104229.1-201ENST00000561364 255 ntBASIC2.1□□□□□ -2.07
APOEP02649 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC2.1□□□□□ -2.07
APOEP02649 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.1□□□□□ -2.07
APOEP02649 MIR4298-201ENST00000584380 73 ntBASIC2.1□□□□□ -2.07
APOEP02649 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.1□□□□□ -2.07
APOEP02649 AC005332.10-201ENST00000612725 619 ntBASIC2.1□□□□□ -2.07
APOEP02649 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC2.1□□□□□ -2.07
APOEP02649 AC011330.2-201ENST00000621680 635 ntBASIC2.1□□□□□ -2.07
APOEP02649 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.1□□□□□ -2.07
APOEP02649 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
APOEP02649 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
APOEP02649 AL137003.2-201ENST00000606924 2538 ntBASIC2.1□□□□□ -2.07
APOEP02649 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
APOEP02649 SNORA38-201ENST00000363946 132 ntBASIC2.09□□□□□ -2.07
APOEP02649 SNORA3A-201ENST00000364113 130 ntBASIC2.09□□□□□ -2.07
APOEP02649 RNA5SP88-201ENST00000365560 109 ntBASIC2.09□□□□□ -2.07
APOEP02649 OR1L1-202ENST00000373686 1083 ntBASIC2.09□□□□□ -2.07
APOEP02649 RNU6-657P-201ENST00000383904 107 ntBASIC2.09□□□□□ -2.07
APOEP02649 MIR17-201ENST00000385012 84 ntBASIC2.09□□□□□ -2.07
APOEP02649 NPM1P10-201ENST00000398310 865 ntBASIC2.09□□□□□ -2.07
APOEP02649 MIR1261-201ENST00000408659 82 ntBASIC2.09□□□□□ -2.07
APOEP02649 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.09□□□□□ -2.07
APOEP02649 RNU6-1328P-201ENST00000410938 106 ntBASIC2.09□□□□□ -2.07
APOEP02649 AL030996.1-201ENST00000411430 235 ntBASIC2.09□□□□□ -2.07
APOEP02649 AL355994.1-201ENST00000424379 260 ntBASIC2.09□□□□□ -2.07
APOEP02649 AC027124.2-201ENST00000428249 105 ntBASIC2.09□□□□□ -2.07
APOEP02649 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.09□□□□□ -2.07
APOEP02649 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
APOEP02649 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
APOEP02649 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.09□□□□□ -2.07
APOEP02649 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
APOEP02649 COL6A4P2-205ENST00000509855 506 ntBASIC2.09□□□□□ -2.07
APOEP02649 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
APOEP02649 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms