Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AL109659.3-201ENST00000624985 950 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 FAM157B-203ENST00000639350 358 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 ZNF209P-201ENST00000593450 2304 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.74□□□□□ -2.13
COL4A1P02462 SEC63P2-201ENST00000503863 1939 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 U8.1-201ENST00000362843 134 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 SNORD114-26-201ENST00000363543 72 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
COL4A1P02462 VN1R42P-201ENST00000424651 344 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 AL513185.2-201ENST00000425543 193 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A1P02462 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.74□□□□□ -2.13
COL4A1P02462 AC092170.1-201ENST00000440211 356 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A1P02462 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.74□□□□□ -2.13
COL4A1P02462 RNA5SP61-201ENST00000516453 100 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.74□□□□□ -2.13
COL4A1P02462 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A1P02462 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A1P02462 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A1P02462 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.74□□□□□ -2.13
COL4A1P02462 AC004217.3-201ENST00000551552 878 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 MYL12BP1-201ENST00000569826 507 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 AC026741.1-201ENST00000605892 482 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 AC096586.1-201ENST00000610267 561 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 AL353770.2-201ENST00000620024 78 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 AC097460.3-201ENST00000623099 442 ntBASIC1.74□□□□□ -2.13
COL4A1P02462 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
COL4A1P02462 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.73□□□□□ -2.13
COL4A1P02462 MTCO1P4-201ENST00000520516 1409 ntBASIC1.73□□□□□ -2.13
COL4A1P02462 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
COL4A1P02462 RNU6-481P-201ENST00000384194 107 ntBASIC1.73□□□□□ -2.13
COL4A1P02462 RNU6-272P-201ENST00000411028 104 ntBASIC1.73□□□□□ -2.13
COL4A1P02462 AC246680.2-201ENST00000422106 389 ntBASIC1.73□□□□□ -2.13
COL4A1P02462 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC1.73□□□□□ -2.13
COL4A1P02462 Z77249.1-201ENST00000444622 1175 ntBASIC1.73□□□□□ -2.13
COL4A1P02462 Z96811.1-201ENST00000445880 108 ntBASIC1.73□□□□□ -2.13
COL4A1P02462 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.73□□□□□ -2.13
COL4A1P02462 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.73□□□□□ -2.13
COL4A1P02462 MTND2P30-201ENST00000456663 382 ntBASIC1.73□□□□□ -2.13
COL4A1P02462 AC096992.1-201ENST00000459808 709 ntBASIC1.73□□□□□ -2.13
COL4A1P02462 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.73□□□□□ -2.13
COL4A1P02462 MTND3P24-201ENST00000506306 329 ntBASIC1.73□□□□□ -2.13
COL4A1P02462 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.73□□□□□ -2.13
COL4A1P02462 AC010625.1-201ENST00000511296 403 ntBASIC1.73□□□□□ -2.13
COL4A1P02462 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.73□□□□□ -2.13
COL4A1P02462 CENPUP2-201ENST00000555897 1186 ntBASIC1.73□□□□□ -2.13
COL4A1P02462 AC079148.1-201ENST00000565944 819 ntBASIC1.73□□□□□ -2.13
COL4A1P02462 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.73□□□□□ -2.13
COL4A1P02462 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.73□□□□□ -2.13
COL4A1P02462 AC084824.5-201ENST00000612009 413 ntBASIC1.73□□□□□ -2.13
COL4A1P02462 MIR6864-201ENST00000617935 70 ntBASIC1.73□□□□□ -2.13
COL4A1P02462 uc_338.20-201ENST00000621563 178 ntBASIC1.73□□□□□ -2.13
COL4A1P02462 AC017104.5-201ENST00000637647 639 ntBASIC1.73□□□□□ -2.13
COL4A1P02462 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
COL4A1P02462 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
COL4A1P02462 RNU6-1339P-201ENST00000363574 91 ntBASIC1.72□□□□□ -2.13
COL4A1P02462 RNU6-461P-201ENST00000364195 107 ntBASIC1.72□□□□□ -2.13
COL4A1P02462 SNORA7.2-201ENST00000364446 145 ntBASIC1.72□□□□□ -2.13
COL4A1P02462 RNU6-1180P-201ENST00000364935 107 ntBASIC1.72□□□□□ -2.13
COL4A1P02462 RNU4-52P-201ENST00000384209 138 ntBASIC1.72□□□□□ -2.13
COL4A1P02462 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.72□□□□□ -2.13
COL4A1P02462 RPS6P14-201ENST00000425165 719 ntBASIC1.72□□□□□ -2.13
COL4A1P02462 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.72□□□□□ -2.13
COL4A1P02462 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.72□□□□□ -2.13
COL4A1P02462 OR51B8P-201ENST00000449892 769 ntBASIC1.72□□□□□ -2.13
COL4A1P02462 AL353718.1-201ENST00000451028 517 ntBASIC1.72□□□□□ -2.13
COL4A1P02462 AC009474.2-201ENST00000451383 136 ntBASIC1.72□□□□□ -2.13
COL4A1P02462 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.72□□□□□ -2.13
COL4A1P02462 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.72□□□□□ -2.13
COL4A1P02462 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
COL4A1P02462 AC034222.1-201ENST00000494052 532 ntBASIC1.72□□□□□ -2.13
COL4A1P02462 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.72□□□□□ -2.13
COL4A1P02462 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1.72□□□□□ -2.13
COL4A1P02462 RNA5SP82-201ENST00000516707 92 ntBASIC1.72□□□□□ -2.13
COL4A1P02462 AP003033.1-201ENST00000527244 415 ntBASIC1.72□□□□□ -2.13
COL4A1P02462 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.72□□□□□ -2.13
COL4A1P02462 PSMA3P-201ENST00000555485 635 ntBASIC1.72□□□□□ -2.13
COL4A1P02462 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.72□□□□□ -2.13
COL4A1P02462 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.72□□□□□ -2.13
COL4A1P02462 DUXAP4-201ENST00000603046 613 ntBASIC1.72□□□□□ -2.13
COL4A1P02462 SEPT7P9-203ENST00000604116 343 ntBASIC1.72□□□□□ -2.13
COL4A1P02462 AC073592.7-201ENST00000623659 507 ntBASIC1.72□□□□□ -2.13
COL4A1P02462 AL356118.1-201ENST00000635272 1078 ntBASIC1.72□□□□□ -2.13
COL4A1P02462 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC1.72□□□□□ -2.13
COL4A1P02462 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
COL4A1P02462 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.72□□□□□ -2.13
COL4A1P02462 MTND4P8-201ENST00000514997 1362 ntBASIC1.72□□□□□ -2.13
COL4A1P02462 AC025263.3-201ENST00000622965 1396 ntBASIC1.72□□□□□ -2.13
COL4A1P02462 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.13
COL4A1P02462 MIR16-2-201ENST00000362117 81 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
COL4A1P02462 USP9YP19-201ENST00000412165 485 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 AL158050.1-201ENST00000416077 457 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 AL357078.2-201ENST00000416486 427 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC1.71□□□□□ -2.14
COL4A1P02462 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC1.71□□□□□ -2.14
COL4A1P02462 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC1.71□□□□□ -2.14
COL4A1P02462 AL365400.1-201ENST00000431854 640 ntBASIC1.71□□□□□ -2.14
COL4A1P02462 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms