Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC100757.1-201ENST00000616872 1835 ntBASIC5.78□□□□□ -1.48
ALDH1A1P00352 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.78□□□□□ -1.48
ALDH1A1P00352 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.77□□□□□ -1.48
ALDH1A1P00352 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.77□□□□□ -1.49
ALDH1A1P00352 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
ALDH1A1P00352 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
ALDH1A1P00352 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
ALDH1A1P00352 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ALDH1A1P00352 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ALDH1A1P00352 SNORD113.2-201ENST00000364166 89 ntBASIC5.77□□□□□ -1.49
ALDH1A1P00352 RNU6-933P-201ENST00000384424 107 ntBASIC5.77□□□□□ -1.49
ALDH1A1P00352 RNU6-131P-201ENST00000391144 107 ntBASIC5.77□□□□□ -1.49
ALDH1A1P00352 RNA5SP494-201ENST00000410653 129 ntBASIC5.77□□□□□ -1.49
ALDH1A1P00352 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.77□□□□□ -1.49
ALDH1A1P00352 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.77□□□□□ -1.49
ALDH1A1P00352 AC016831.4-201ENST00000438302 307 ntBASIC5.77□□□□□ -1.49
ALDH1A1P00352 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.77□□□□□ -1.49
ALDH1A1P00352 BTF3P6-201ENST00000448054 499 ntBASIC5.77□□□□□ -1.49
ALDH1A1P00352 AL133244.1-201ENST00000456007 258 ntBASIC5.77□□□□□ -1.49
ALDH1A1P00352 RPL21P41-201ENST00000459863 264 ntBASIC5.77□□□□□ -1.49
ALDH1A1P00352 AC010618.1-201ENST00000469924 477 ntBASIC5.77□□□□□ -1.49
ALDH1A1P00352 RPL30P10-201ENST00000488148 337 ntBASIC5.77□□□□□ -1.49
ALDH1A1P00352 RN7SL604P-201ENST00000492589 296 ntBASIC5.77□□□□□ -1.49
ALDH1A1P00352 RPS27P26-201ENST00000494583 239 ntBASIC5.77□□□□□ -1.49
ALDH1A1P00352 AC026402.1-201ENST00000513642 170 ntBASIC5.77□□□□□ -1.49
ALDH1A1P00352 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.77□□□□□ -1.49
ALDH1A1P00352 AC091144.1-201ENST00000519573 138 ntBASIC5.77□□□□□ -1.49
ALDH1A1P00352 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.77□□□□□ -1.49
ALDH1A1P00352 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ALDH1A1P00352 AC007458.1-201ENST00000542812 373 ntBASIC5.77□□□□□ -1.49
ALDH1A1P00352 AC120057.2-201ENST00000571520 271 ntBASIC5.77□□□□□ -1.49
ALDH1A1P00352 AC067852.3-201ENST00000589177 561 ntBASIC5.77□□□□□ -1.49
ALDH1A1P00352 AL162424.1-201ENST00000602325 221 ntBASIC5.77□□□□□ -1.49
ALDH1A1P00352 TUG1_2.1-201ENST00000614234 87 ntBASIC5.77□□□□□ -1.49
ALDH1A1P00352 AC091895.1-201ENST00000624494 256 ntBASIC5.77□□□□□ -1.49
ALDH1A1P00352 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
ALDH1A1P00352 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.77□□□□□ -1.49
ALDH1A1P00352 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ALDH1A1P00352 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
ALDH1A1P00352 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.77□□□□□ -1.49
ALDH1A1P00352 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
ALDH1A1P00352 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
ALDH1A1P00352 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ALDH1A1P00352 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.77□□□□□ -1.49
ALDH1A1P00352 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ALDH1A1P00352 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.77□□□□□ -1.49
ALDH1A1P00352 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
ALDH1A1P00352 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ALDH1A1P00352 AC140134.1-201ENST00000511830 3544 ntBASIC5.77□□□□□ -1.49
ALDH1A1P00352 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
ALDH1A1P00352 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ALDH1A1P00352 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
ALDH1A1P00352 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ALDH1A1P00352 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
ALDH1A1P00352 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
ALDH1A1P00352 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.76□□□□□ -1.49
ALDH1A1P00352 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ALDH1A1P00352 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ALDH1A1P00352 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ALDH1A1P00352 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
ALDH1A1P00352 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
ALDH1A1P00352 RNA5SP447-201ENST00000363749 119 ntBASIC5.76□□□□□ -1.49
ALDH1A1P00352 Y_RNA.441-201ENST00000384123 112 ntBASIC5.76□□□□□ -1.49
ALDH1A1P00352 MIR589-201ENST00000385238 99 ntBASIC5.76□□□□□ -1.49
ALDH1A1P00352 RPL21P75-201ENST00000396599 483 ntBASIC5.76□□□□□ -1.49
ALDH1A1P00352 RPL21P28-201ENST00000401418 483 ntBASIC5.76□□□□□ -1.49
ALDH1A1P00352 AL079342.1-201ENST00000401460 267 ntBASIC5.76□□□□□ -1.49
ALDH1A1P00352 AC114755.2-201ENST00000413520 361 ntBASIC5.76□□□□□ -1.49
ALDH1A1P00352 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC5.76□□□□□ -1.49
ALDH1A1P00352 RPS15AP6-201ENST00000420703 385 ntBASIC5.76□□□□□ -1.49
ALDH1A1P00352 AL590556.1-201ENST00000423231 483 ntBASIC5.76□□□□□ -1.49
ALDH1A1P00352 HSPE1P25-201ENST00000455484 251 ntBASIC5.76□□□□□ -1.49
ALDH1A1P00352 RPS5P7-201ENST00000456664 608 ntBASIC5.76□□□□□ -1.49
ALDH1A1P00352 RPL21P11-201ENST00000461458 483 ntBASIC5.76□□□□□ -1.49
ALDH1A1P00352 RPL21P39-201ENST00000463605 483 ntBASIC5.76□□□□□ -1.49
ALDH1A1P00352 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.76□□□□□ -1.49
ALDH1A1P00352 AC132942.1-201ENST00000486753 483 ntBASIC5.76□□□□□ -1.49
ALDH1A1P00352 AC140059.1-201ENST00000489238 361 ntBASIC5.76□□□□□ -1.49
ALDH1A1P00352 AC093591.1-201ENST00000491435 481 ntBASIC5.76□□□□□ -1.49
ALDH1A1P00352 RPL21P16-201ENST00000495531 483 ntBASIC5.76□□□□□ -1.49
ALDH1A1P00352 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.76□□□□□ -1.49
ALDH1A1P00352 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.76□□□□□ -1.49
ALDH1A1P00352 AC092470.1-201ENST00000546187 132 ntBASIC5.76□□□□□ -1.49
ALDH1A1P00352 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.76□□□□□ -1.49
ALDH1A1P00352 AC024614.2-201ENST00000577584 372 ntBASIC5.76□□□□□ -1.49
ALDH1A1P00352 Y_RNA.772-201ENST00000606692 102 ntBASIC5.76□□□□□ -1.49
ALDH1A1P00352 AL031601.2-202ENST00000622650 282 ntBASIC5.76□□□□□ -1.49
ALDH1A1P00352 AC011944.2-201ENST00000624440 683 ntBASIC5.76□□□□□ -1.49
ALDH1A1P00352 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.76□□□□□ -1.49
ALDH1A1P00352 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.76□□□□□ -1.49
ALDH1A1P00352 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
ALDH1A1P00352 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.76□□□□□ -1.49
ALDH1A1P00352 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.76□□□□□ -1.49
ALDH1A1P00352 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.76□□□□□ -1.49
ALDH1A1P00352 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ALDH1A1P00352 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
ALDH1A1P00352 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ALDH1A1P00352 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ALDH1A1P00352 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
ALDH1A1P00352 AP005432.1-201ENST00000580891 3485 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms