Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.29□□□□□ -2.2
ABCA1O95477 PCNAP1-201ENST00000505363 709 ntBASIC1.29□□□□□ -2.2
ABCA1O95477 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC1.29□□□□□ -2.2
ABCA1O95477 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.29□□□□□ -2.2
ABCA1O95477 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.29□□□□□ -2.2
ABCA1O95477 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
ABCA1O95477 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.29□□□□□ -2.2
ABCA1O95477 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.29□□□□□ -2.2
ABCA1O95477 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC1.29□□□□□ -2.2
ABCA1O95477 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.29□□□□□ -2.2
ABCA1O95477 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.29□□□□□ -2.2
ABCA1O95477 CCT4P2-201ENST00000233836 1548 ntBASIC1.29□□□□□ -2.2
ABCA1O95477 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
ABCA1O95477 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
ABCA1O95477 AC006026.1-201ENST00000444025 1803 ntBASIC1.28□□□□□ -2.2
ABCA1O95477 FO393413.1-201ENST00000402892 195 ntBASIC1.28□□□□□ -2.2
ABCA1O95477 SFR1P1-201ENST00000403720 688 ntBASIC1.28□□□□□ -2.2
ABCA1O95477 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.28□□□□□ -2.2
ABCA1O95477 UBE2V1P9-201ENST00000414760 368 ntBASIC1.28□□□□□ -2.2
ABCA1O95477 AL627224.1-201ENST00000448334 444 ntBASIC1.28□□□□□ -2.2
ABCA1O95477 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.28□□□□□ -2.2
ABCA1O95477 RPS15AP17-201ENST00000470598 390 ntBASIC1.28□□□□□ -2.2
ABCA1O95477 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.28□□□□□ -2.2
ABCA1O95477 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.28□□□□□ -2.2
ABCA1O95477 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.28□□□□□ -2.2
ABCA1O95477 AC005730.3-201ENST00000583067 366 ntBASIC1.28□□□□□ -2.2
ABCA1O95477 AC135178.6-201ENST00000605314 398 ntBASIC1.28□□□□□ -2.2
ABCA1O95477 AC055876.5-201ENST00000605667 259 ntBASIC1.28□□□□□ -2.2
ABCA1O95477 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
ABCA1O95477 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.28□□□□□ -2.2
ABCA1O95477 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.28□□□□□ -2.2
ABCA1O95477 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
ABCA1O95477 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
ABCA1O95477 MTCO1P4-201ENST00000520516 1409 ntBASIC1.28□□□□□ -2.2
ABCA1O95477 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
ABCA1O95477 AL356320.2-201ENST00000417263 507 ntBASIC1.28□□□□□ -2.2
ABCA1O95477 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.28□□□□□ -2.2
ABCA1O95477 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.28□□□□□ -2.2
ABCA1O95477 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.28□□□□□ -2.2
ABCA1O95477 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.28□□□□□ -2.2
ABCA1O95477 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.28□□□□□ -2.2
ABCA1O95477 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.28□□□□□ -2.2
ABCA1O95477 OR5AQ1P-201ENST00000527596 927 ntBASIC1.28□□□□□ -2.2
ABCA1O95477 AC084851.1-201ENST00000529105 249 ntBASIC1.28□□□□□ -2.2
ABCA1O95477 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.28□□□□□ -2.2
ABCA1O95477 RPL21P5-201ENST00000554662 472 ntBASIC1.28□□□□□ -2.2
ABCA1O95477 AC126118.1-201ENST00000607744 628 ntBASIC1.28□□□□□ -2.2
ABCA1O95477 AL161734.1-201ENST00000609720 557 ntBASIC1.28□□□□□ -2.2
ABCA1O95477 AC097372.4-201ENST00000625025 466 ntBASIC1.28□□□□□ -2.2
ABCA1O95477 ZNF209P-201ENST00000593450 2304 ntBASIC1.28□□□□□ -2.21
ABCA1O95477 BX510359.4-201ENST00000423750 193 ntBASIC1.27□□□□□ -2.21
ABCA1O95477 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.27□□□□□ -2.21
ABCA1O95477 TPTE2P6-202ENST00000445572 1007 ntBASIC1.27□□□□□ -2.21
ABCA1O95477 AL360221.1-201ENST00000445989 335 ntBASIC1.27□□□□□ -2.21
ABCA1O95477 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.27□□□□□ -2.21
ABCA1O95477 snoU13.4-201ENST00000458916 104 ntBASIC1.27□□□□□ -2.21
ABCA1O95477 AC025459.1-201ENST00000504072 156 ntBASIC1.27□□□□□ -2.21
ABCA1O95477 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.27□□□□□ -2.21
ABCA1O95477 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.27□□□□□ -2.21
ABCA1O95477 MIR3616-201ENST00000584070 92 ntBASIC1.27□□□□□ -2.21
ABCA1O95477 AC012493.3-201ENST00000604494 112 ntBASIC1.27□□□□□ -2.21
ABCA1O95477 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.27□□□□□ -2.21
ABCA1O95477 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.27□□□□□ -2.21
ABCA1O95477 AC007342.9-201ENST00000623877 1385 ntBASIC1.27□□□□□ -2.21
ABCA1O95477 RNU4-72P-201ENST00000410754 173 ntBASIC1.27□□□□□ -2.21
ABCA1O95477 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.27□□□□□ -2.21
ABCA1O95477 AL121871.1-201ENST00000443413 436 ntBASIC1.27□□□□□ -2.21
ABCA1O95477 USP9YP10-201ENST00000454868 628 ntBASIC1.27□□□□□ -2.21
ABCA1O95477 NAP1L1P3-201ENST00000462291 880 ntBASIC1.27□□□□□ -2.21
ABCA1O95477 AC090453.1-201ENST00000495560 436 ntBASIC1.27□□□□□ -2.21
ABCA1O95477 AC008427.1-201ENST00000503102 655 ntBASIC1.27□□□□□ -2.21
ABCA1O95477 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.27□□□□□ -2.21
ABCA1O95477 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.27□□□□□ -2.21
ABCA1O95477 AC104057.1-201ENST00000515547 497 ntBASIC1.27□□□□□ -2.21
ABCA1O95477 ERHP1-201ENST00000523006 310 ntBASIC1.27□□□□□ -2.21
ABCA1O95477 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.27□□□□□ -2.21
ABCA1O95477 AC121758.2-201ENST00000553271 193 ntBASIC1.27□□□□□ -2.21
ABCA1O95477 AC113368.1-201ENST00000603736 382 ntBASIC1.27□□□□□ -2.21
ABCA1O95477 AC011374.2-201ENST00000607135 526 ntBASIC1.27□□□□□ -2.21
ABCA1O95477 AC098679.5-201ENST00000624394 571 ntBASIC1.27□□□□□ -2.21
ABCA1O95477 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.27□□□□□ -2.21
ABCA1O95477 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.27□□□□□ -2.21
ABCA1O95477 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.26□□□□□ -2.21
ABCA1O95477 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
ABCA1O95477 RNA5SP393-201ENST00000363423 117 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 Y_RNA.295-201ENST00000364918 102 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 RNU6-53P-201ENST00000365367 106 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 SNORD23.1-201ENST00000408212 104 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.26□□□□□ -2.21
ABCA1O95477 POLR2J4-204ENST00000418424 324 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 ARL2BPP3-201ENST00000421226 480 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 AL354695.1-201ENST00000427935 228 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 AC097499.1-201ENST00000444277 208 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 RNU7-26P-201ENST00000458980 63 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.26□□□□□ -2.21
ABCA1O95477 COX6CP14-201ENST00000469580 174 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
ABCA1O95477 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 AC135721.1-201ENST00000497954 479 ntBASIC1.26□□□□□ -2.21
ABCA1O95477 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms