Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 MAPK10-322ENST00000641485 4530 ntBASIC3.71□□□□□ -1.82
MBD4O95243 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
MBD4O95243 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.7□□□□□ -1.82
MBD4O95243 Y_RNA.169-201ENST00000363745 96 ntBASIC3.7□□□□□ -1.82
MBD4O95243 SNORA14A-201ENST00000364773 135 ntBASIC3.7□□□□□ -1.82
MBD4O95243 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.7□□□□□ -1.82
MBD4O95243 Z92545.1-201ENST00000411782 234 ntBASIC3.7□□□□□ -1.82
MBD4O95243 RPL17P12-201ENST00000413391 526 ntBASIC3.7□□□□□ -1.82
MBD4O95243 USP9YP26-201ENST00000421008 661 ntBASIC3.7□□□□□ -1.82
MBD4O95243 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.7□□□□□ -1.82
MBD4O95243 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.7□□□□□ -1.82
MBD4O95243 AL353777.1-201ENST00000425552 326 ntBASIC3.7□□□□□ -1.82
MBD4O95243 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.7□□□□□ -1.82
MBD4O95243 MTND1P30-201ENST00000441241 901 ntBASIC3.7□□□□□ -1.82
MBD4O95243 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.7□□□□□ -1.82
MBD4O95243 RPS4XP22-201ENST00000480755 780 ntBASIC3.7□□□□□ -1.82
MBD4O95243 RNU6-390P-201ENST00000516259 103 ntBASIC3.7□□□□□ -1.82
MBD4O95243 AC025881.1-201ENST00000518851 512 ntBASIC3.7□□□□□ -1.82
MBD4O95243 ATP5F1P5-201ENST00000526403 760 ntBASIC3.7□□□□□ -1.82
MBD4O95243 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
MBD4O95243 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
MBD4O95243 AC123904.3-201ENST00000547218 814 ntBASIC3.7□□□□□ -1.82
MBD4O95243 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.7□□□□□ -1.82
MBD4O95243 AC093012.1-202ENST00000549403 582 ntBASIC3.7□□□□□ -1.82
MBD4O95243 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.7□□□□□ -1.82
MBD4O95243 ACTR3BP3-201ENST00000565577 979 ntBASIC3.7□□□□□ -1.82
MBD4O95243 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.7□□□□□ -1.82
MBD4O95243 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.7□□□□□ -1.82
MBD4O95243 WISP1-OT1-201ENST00000602893 642 ntBASIC3.7□□□□□ -1.82
MBD4O95243 AC092354.1-201ENST00000606057 376 ntBASIC3.7□□□□□ -1.82
MBD4O95243 AC004696.1-201ENST00000614345 607 ntBASIC3.7□□□□□ -1.82
MBD4O95243 AC009159.1-201ENST00000618386 642 ntBASIC3.7□□□□□ -1.82
MBD4O95243 SRP72P2-201ENST00000344851 1979 ntBASIC3.7□□□□□ -1.82
MBD4O95243 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
MBD4O95243 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
MBD4O95243 AL079305.1-201ENST00000623159 3008 ntBASIC3.7□□□□□ -1.82
MBD4O95243 AC110774.1-201ENST00000623567 2018 ntBASIC3.7□□□□□ -1.82
MBD4O95243 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
MBD4O95243 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
MBD4O95243 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
MBD4O95243 GNG5P1-201ENST00000255500 204 ntBASIC3.69□□□□□ -1.82
MBD4O95243 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
MBD4O95243 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
MBD4O95243 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
MBD4O95243 AL354719.1-201ENST00000406535 843 ntBASIC3.69□□□□□ -1.82
MBD4O95243 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.69□□□□□ -1.82
MBD4O95243 AC006539.3-201ENST00000454258 129 ntBASIC3.69□□□□□ -1.82
MBD4O95243 AP002884.2-201ENST00000471647 395 ntBASIC3.69□□□□□ -1.82
MBD4O95243 DSTNP2-201ENST00000504533 515 ntBASIC3.69□□□□□ -1.82
MBD4O95243 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
MBD4O95243 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
MBD4O95243 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
MBD4O95243 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.69□□□□□ -1.82
MBD4O95243 AC009812.2-201ENST00000517657 457 ntBASIC3.69□□□□□ -1.82
MBD4O95243 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.69□□□□□ -1.82
MBD4O95243 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
MBD4O95243 TRAV28-201ENST00000557548 323 ntBASIC3.69□□□□□ -1.82
MBD4O95243 HMGB1P6-201ENST00000569046 646 ntBASIC3.69□□□□□ -1.82
MBD4O95243 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.69□□□□□ -1.82
MBD4O95243 AC002545.1-201ENST00000592511 181 ntBASIC3.69□□□□□ -1.82
MBD4O95243 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.69□□□□□ -1.82
MBD4O95243 AL591516.1-201ENST00000611326 274 ntBASIC3.69□□□□□ -1.82
MBD4O95243 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.69□□□□□ -1.82
MBD4O95243 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.69□□□□□ -1.82
MBD4O95243 MIR7153-201ENST00000637758 57 ntBASIC3.69□□□□□ -1.82
MBD4O95243 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.69□□□□□ -1.82
MBD4O95243 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.69□□□□□ -1.82
MBD4O95243 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
MBD4O95243 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.68□□□□□ -1.82
MBD4O95243 RNU6-533P-201ENST00000384144 107 ntBASIC3.68□□□□□ -1.82
MBD4O95243 SNORD115.1-201ENST00000391109 76 ntBASIC3.68□□□□□ -1.82
MBD4O95243 AL138885.1-201ENST00000405921 675 ntBASIC3.68□□□□□ -1.82
MBD4O95243 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.68□□□□□ -1.82
MBD4O95243 TIMM9P1-201ENST00000436122 256 ntBASIC3.68□□□□□ -1.82
MBD4O95243 Z82210.1-201ENST00000440037 231 ntBASIC3.68□□□□□ -1.82
MBD4O95243 AC140076.1-201ENST00000449897 361 ntBASIC3.68□□□□□ -1.82
MBD4O95243 SETP11-201ENST00000473027 690 ntBASIC3.68□□□□□ -1.82
MBD4O95243 AC010631.1-201ENST00000474150 156 ntBASIC3.68□□□□□ -1.82
MBD4O95243 AP000797.1-201ENST00000478870 387 ntBASIC3.68□□□□□ -1.82
MBD4O95243 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.68□□□□□ -1.82
MBD4O95243 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.68□□□□□ -1.82
MBD4O95243 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
MBD4O95243 RNU6-64P-201ENST00000517119 105 ntBASIC3.68□□□□□ -1.82
MBD4O95243 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.68□□□□□ -1.82
MBD4O95243 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.68□□□□□ -1.82
MBD4O95243 PSMA2P1-201ENST00000526365 646 ntBASIC3.68□□□□□ -1.82
MBD4O95243 AP002748.2-201ENST00000528671 348 ntBASIC3.68□□□□□ -1.82
MBD4O95243 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.68□□□□□ -1.82
MBD4O95243 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.68□□□□□ -1.82
MBD4O95243 AC135628.1-201ENST00000568867 534 ntBASIC3.68□□□□□ -1.82
MBD4O95243 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.68□□□□□ -1.82
MBD4O95243 AC083760.1-201ENST00000589621 670 ntBASIC3.68□□□□□ -1.82
MBD4O95243 KC877982.1-201ENST00000602313 470 ntBASIC3.68□□□□□ -1.82
MBD4O95243 AL359999.1-201ENST00000604513 294 ntBASIC3.68□□□□□ -1.82
MBD4O95243 AC245517.5-201ENST00000611529 162 ntBASIC3.68□□□□□ -1.82
MBD4O95243 AC097520.1-201ENST00000624435 385 ntBASIC3.68□□□□□ -1.82
MBD4O95243 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.68□□□□□ -1.82
MBD4O95243 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.68□□□□□ -1.82
MBD4O95243 AC103988.1-201ENST00000566382 2177 ntBASIC3.68□□□□□ -1.82
MBD4O95243 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms