Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC118942.1-201ENST00000529674 1035 ntBASIC0.53□□□□□ -2.32
USH2AO75445 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.53□□□□□ -2.32
USH2AO75445 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC0.53□□□□□ -2.32
USH2AO75445 MIR4802-201ENST00000581881 80 ntBASIC0.53□□□□□ -2.32
USH2AO75445 MIR4653-201ENST00000585107 83 ntBASIC0.53□□□□□ -2.32
USH2AO75445 AC007742.2-201ENST00000618226 398 ntBASIC0.53□□□□□ -2.32
USH2AO75445 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.53□□□□□ -2.32
USH2AO75445 AP003499.2-201ENST00000624100 483 ntBASIC0.53□□□□□ -2.32
USH2AO75445 AC005517.2-201ENST00000424673 553 ntBASIC0.53□□□□□ -2.32
USH2AO75445 TRAPPC2P5-201ENST00000426293 308 ntBASIC0.53□□□□□ -2.32
USH2AO75445 MTND5P25-201ENST00000430499 799 ntBASIC0.53□□□□□ -2.32
USH2AO75445 AL161788.1-201ENST00000441805 169 ntBASIC0.53□□□□□ -2.32
USH2AO75445 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.53□□□□□ -2.32
USH2AO75445 AC089999.1-201ENST00000460336 374 ntBASIC0.53□□□□□ -2.32
USH2AO75445 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC0.53□□□□□ -2.32
USH2AO75445 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
USH2AO75445 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
USH2AO75445 Y_RNA.18-201ENST00000362461 102 ntBASIC0.53□□□□□ -2.32
USH2AO75445 RNU1-148P-201ENST00000384472 162 ntBASIC0.53□□□□□ -2.32
USH2AO75445 FCF1P2-201ENST00000415284 583 ntBASIC0.53□□□□□ -2.32
USH2AO75445 RWDD4P2-201ENST00000426392 563 ntBASIC0.53□□□□□ -2.32
USH2AO75445 AC012497.1-201ENST00000429392 575 ntBASIC0.53□□□□□ -2.32
USH2AO75445 RWDD4P1-201ENST00000488019 565 ntBASIC0.53□□□□□ -2.32
USH2AO75445 RNU6-758P-201ENST00000516292 89 ntBASIC0.53□□□□□ -2.32
USH2AO75445 RNA5SP82-201ENST00000516707 92 ntBASIC0.53□□□□□ -2.32
USH2AO75445 AP004607.1-201ENST00000524456 203 ntBASIC0.53□□□□□ -2.32
USH2AO75445 HSPE1P4-201ENST00000550617 308 ntBASIC0.53□□□□□ -2.32
USH2AO75445 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
USH2AO75445 SNORD114-15-201ENST00000364687 72 ntBASIC0.53□□□□□ -2.33
USH2AO75445 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC0.53□□□□□ -2.33
USH2AO75445 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.53□□□□□ -2.33
USH2AO75445 AC004941.2-201ENST00000427009 228 ntBASIC0.53□□□□□ -2.33
USH2AO75445 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC0.53□□□□□ -2.33
USH2AO75445 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC0.53□□□□□ -2.33
USH2AO75445 RPL21P39-201ENST00000463605 483 ntBASIC0.53□□□□□ -2.33
USH2AO75445 AC104692.1-201ENST00000472406 90 ntBASIC0.53□□□□□ -2.33
USH2AO75445 RPS27AP18-201ENST00000515536 459 ntBASIC0.53□□□□□ -2.33
USH2AO75445 RNU4-77P-201ENST00000516692 156 ntBASIC0.53□□□□□ -2.33
USH2AO75445 SYF2P1-201ENST00000550658 413 ntBASIC0.53□□□□□ -2.33
USH2AO75445 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.53□□□□□ -2.33
USH2AO75445 AC010200.2-201ENST00000605098 235 ntBASIC0.53□□□□□ -2.33
USH2AO75445 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC0.53□□□□□ -2.33
USH2AO75445 Z69720.2-201ENST00000624755 279 ntBASIC0.53□□□□□ -2.33
USH2AO75445 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.53□□□□□ -2.33
USH2AO75445 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.33
USH2AO75445 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC0.52□□□□□ -2.33
USH2AO75445 AC233728.2-201ENST00000425348 757 ntBASIC0.52□□□□□ -2.33
USH2AO75445 AL353706.1-201ENST00000436728 494 ntBASIC0.52□□□□□ -2.33
USH2AO75445 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.52□□□□□ -2.33
USH2AO75445 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.52□□□□□ -2.33
USH2AO75445 Y_RNA.675-201ENST00000516389 149 ntBASIC0.52□□□□□ -2.33
USH2AO75445 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.52□□□□□ -2.33
USH2AO75445 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC0.52□□□□□ -2.33
USH2AO75445 MIR4446-201ENST00000578505 67 ntBASIC0.52□□□□□ -2.33
USH2AO75445 MIR198-201ENST00000637333 62 ntBASIC0.52□□□□□ -2.33
USH2AO75445 CENPCP1-201ENST00000533085 2578 ntBASIC0.52□□□□□ -2.33
USH2AO75445 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
USH2AO75445 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.52□□□□□ -2.33
USH2AO75445 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC0.52□□□□□ -2.33
USH2AO75445 AC119618.1-201ENST00000434191 222 ntBASIC0.52□□□□□ -2.33
USH2AO75445 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.52□□□□□ -2.33
USH2AO75445 AC008571.1-201ENST00000467232 300 ntBASIC0.52□□□□□ -2.33
USH2AO75445 MTND4LP3-201ENST00000468320 276 ntBASIC0.52□□□□□ -2.33
USH2AO75445 FO393415.2-201ENST00000480085 343 ntBASIC0.52□□□□□ -2.33
USH2AO75445 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC0.52□□□□□ -2.33
USH2AO75445 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC0.52□□□□□ -2.33
USH2AO75445 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC0.52□□□□□ -2.33
USH2AO75445 Y_RNA.757-201ENST00000578934 114 ntBASIC0.52□□□□□ -2.33
USH2AO75445 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC0.52□□□□□ -2.33
USH2AO75445 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.52□□□□□ -2.33
USH2AO75445 AL445213.1-201ENST00000412589 747 ntBASIC0.52□□□□□ -2.33
USH2AO75445 SEC63P1-201ENST00000425785 1258 ntBASIC0.52□□□□□ -2.33
USH2AO75445 AC087190.1-201ENST00000484462 480 ntBASIC0.52□□□□□ -2.33
USH2AO75445 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.52□□□□□ -2.33
USH2AO75445 AC107918.3-201ENST00000533272 382 ntBASIC0.52□□□□□ -2.33
USH2AO75445 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.52□□□□□ -2.33
USH2AO75445 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC0.52□□□□□ -2.33
USH2AO75445 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC0.52□□□□□ -2.33
USH2AO75445 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC0.52□□□□□ -2.33
USH2AO75445 SUMO1P4-201ENST00000429430 302 ntBASIC0.52□□□□□ -2.33
USH2AO75445 RPL30P12-201ENST00000474666 353 ntBASIC0.52□□□□□ -2.33
USH2AO75445 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC0.52□□□□□ -2.33
USH2AO75445 LIAS-206ENST00000513731 826 ntTSL 5 BASIC0.52□□□□□ -2.33
USH2AO75445 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC0.52□□□□□ -2.33
USH2AO75445 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.52□□□□□ -2.33
USH2AO75445 AC034268.2-201ENST00000571784 482 ntBASIC0.52□□□□□ -2.33
USH2AO75445 ABI1P1-201ENST00000603375 1120 ntBASIC0.52□□□□□ -2.33
USH2AO75445 AC013244.2-201ENST00000603396 103 ntBASIC0.52□□□□□ -2.33
USH2AO75445 FAM71BP1-201ENST00000604431 523 ntBASIC0.52□□□□□ -2.33
USH2AO75445 AL049779.4-201ENST00000604500 156 ntBASIC0.52□□□□□ -2.33
USH2AO75445 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
USH2AO75445 MOB4-205ENST00000409916 829 ntTSL 3 BASIC0.51□□□□□ -2.33
USH2AO75445 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC0.51□□□□□ -2.33
USH2AO75445 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC0.51□□□□□ -2.33
USH2AO75445 AC121758.2-201ENST00000553271 193 ntBASIC0.51□□□□□ -2.33
USH2AO75445 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC0.51□□□□□ -2.33
USH2AO75445 AL390240.1-201ENST00000612950 384 ntBASIC0.51□□□□□ -2.33
USH2AO75445 AC092140.2-201ENST00000618027 521 ntBASIC0.51□□□□□ -2.33
USH2AO75445 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
USH2AO75445 ZNF33CP-201ENST00000432492 2030 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms