Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 AC027290.2-201ENST00000623210 18662 ntBASIC4.94□□□□□ -1.62
VAMP4O75379 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VAMP4O75379 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
VAMP4O75379 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.94□□□□□ -1.62
VAMP4O75379 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
VAMP4O75379 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VAMP4O75379 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VAMP4O75379 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.94□□□□□ -1.62
VAMP4O75379 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.93□□□□□ -1.62
VAMP4O75379 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VAMP4O75379 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.93□□□□□ -1.62
VAMP4O75379 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.93□□□□□ -1.62
VAMP4O75379 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.93□□□□□ -1.62
VAMP4O75379 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
VAMP4O75379 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VAMP4O75379 MIR448-201ENST00000362131 111 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 SNORA62.1-201ENST00000364287 154 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 RNA5SP97-201ENST00000365006 84 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 Y_RNA.315-201ENST00000365117 102 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 RNU4-66P-201ENST00000365199 138 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 RNU6-641P-201ENST00000384006 107 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 RNU6-831P-201ENST00000384548 107 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 RNU6-754P-201ENST00000391166 107 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 RNA5SP104-201ENST00000410989 118 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 NDUFB4P5-201ENST00000415445 361 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 RPS12P23-201ENST00000419579 400 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 AC018644.1-201ENST00000429934 551 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 ATP5HP2-201ENST00000433885 485 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.93□□□□□ -1.62
VAMP4O75379 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.93□□□□□ -1.62
VAMP4O75379 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.93□□□□□ -1.62
VAMP4O75379 PPP1R2P5-201ENST00000457256 603 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.93□□□□□ -1.62
VAMP4O75379 ST13P14-201ENST00000474095 734 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 AC084198.1-201ENST00000477747 402 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 AC096576.1-201ENST00000489014 359 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 MTND5P5-201ENST00000503764 376 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 KLHL2P1-201ENST00000508691 521 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 RAC1P2-201ENST00000511164 579 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 Y_RNA.665-201ENST00000516177 98 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 RN7SKP116-201ENST00000516902 319 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 RNU6-798P-201ENST00000516912 103 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.93□□□□□ -1.62
VAMP4O75379 AL133271.1-201ENST00000538229 291 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.93□□□□□ -1.62
VAMP4O75379 CYCSP30-201ENST00000546447 172 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.93□□□□□ -1.62
VAMP4O75379 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.93□□□□□ -1.62
VAMP4O75379 NCAPGP2-201ENST00000557911 754 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 AC026464.5-201ENST00000562497 722 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 MIR5685-201ENST00000579080 79 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
VAMP4O75379 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.93□□□□□ -1.62
VAMP4O75379 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.93□□□□□ -1.62
VAMP4O75379 AL365204.3-201ENST00000612448 685 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 AC093838.1-201ENST00000613014 469 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.93□□□□□ -1.62
VAMP4O75379 AL133412.1-201ENST00000380194 2992 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.93□□□□□ -1.62
VAMP4O75379 TAB3P1-202ENST00000452645 1634 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 NEAT1-202ENST00000501122 22743 ntBASIC4.93□□□□□ -1.62
VAMP4O75379 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VAMP4O75379 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.93□□□□□ -1.62
VAMP4O75379 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.92□□□□□ -1.62
VAMP4O75379 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VAMP4O75379 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
VAMP4O75379 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VAMP4O75379 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.92□□□□□ -1.62
VAMP4O75379 RNU6-522P-201ENST00000364497 107 ntBASIC4.92□□□□□ -1.62
VAMP4O75379 RNU5E-6P-201ENST00000365574 115 ntBASIC4.92□□□□□ -1.62
VAMP4O75379 RNU6-1029P-201ENST00000384109 107 ntBASIC4.92□□□□□ -1.62
VAMP4O75379 AL136372.1-201ENST00000403060 228 ntBASIC4.92□□□□□ -1.62
VAMP4O75379 AL606923.1-201ENST00000406616 190 ntBASIC4.92□□□□□ -1.62
VAMP4O75379 RPL23AP48-201ENST00000406913 488 ntBASIC4.92□□□□□ -1.62
VAMP4O75379 RNA5SP39-201ENST00000411245 120 ntBASIC4.92□□□□□ -1.62
VAMP4O75379 AL353729.1-201ENST00000425044 720 ntBASIC4.92□□□□□ -1.62
VAMP4O75379 AC092017.2-201ENST00000427600 362 ntBASIC4.92□□□□□ -1.62
VAMP4O75379 AC008065.1-201ENST00000428525 348 ntBASIC4.92□□□□□ -1.62
VAMP4O75379 AC087650.1-201ENST00000431445 468 ntBASIC4.92□□□□□ -1.62
VAMP4O75379 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.92□□□□□ -1.62
VAMP4O75379 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.92□□□□□ -1.62
VAMP4O75379 AL590639.1-201ENST00000456484 337 ntBASIC4.92□□□□□ -1.62
VAMP4O75379 RPS29P15-201ENST00000458329 171 ntBASIC4.92□□□□□ -1.62
VAMP4O75379 AC005798.1-201ENST00000513715 387 ntBASIC4.92□□□□□ -1.62
VAMP4O75379 NARSP2-201ENST00000518524 679 ntBASIC4.92□□□□□ -1.62
VAMP4O75379 IGKV2D-36-201ENST00000518643 226 ntBASIC4.92□□□□□ -1.62
VAMP4O75379 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.92□□□□□ -1.62
VAMP4O75379 FAM60DP-201ENST00000524174 632 ntBASIC4.92□□□□□ -1.62
VAMP4O75379 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VAMP4O75379 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.92□□□□□ -1.62
VAMP4O75379 MIR4703-201ENST00000577728 79 ntBASIC4.92□□□□□ -1.62
VAMP4O75379 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.92□□□□□ -1.62
VAMP4O75379 SNORA62.6-201ENST00000606322 83 ntBASIC4.92□□□□□ -1.62
VAMP4O75379 RNU1-30P-201ENST00000606575 163 ntBASIC4.92□□□□□ -1.62
VAMP4O75379 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.92□□□□□ -1.62
VAMP4O75379 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.92□□□□□ -1.62
VAMP4O75379 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
VAMP4O75379 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms