Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.29□□□□□ -1.88
PTP4A3O75365 RNU6-579P-201ENST00000516879 102 ntBASIC3.29□□□□□ -1.88
PTP4A3O75365 RNA5SP380-201ENST00000517190 98 ntBASIC3.29□□□□□ -1.88
PTP4A3O75365 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.29□□□□□ -1.88
PTP4A3O75365 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.29□□□□□ -1.88
PTP4A3O75365 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.29□□□□□ -1.88
PTP4A3O75365 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.29□□□□□ -1.88
PTP4A3O75365 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.29□□□□□ -1.88
PTP4A3O75365 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.29□□□□□ -1.88
PTP4A3O75365 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.29□□□□□ -1.88
PTP4A3O75365 AC010620.1-201ENST00000601088 1102 ntBASIC3.29□□□□□ -1.88
PTP4A3O75365 AC007363.1-201ENST00000604736 620 ntBASIC3.29□□□□□ -1.88
PTP4A3O75365 AP002360.4-201ENST00000606980 481 ntBASIC3.29□□□□□ -1.88
PTP4A3O75365 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PTP4A3O75365 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
PTP4A3O75365 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.29□□□□□ -1.88
PTP4A3O75365 AL354798.1-201ENST00000622505 329 ntBASIC3.29□□□□□ -1.88
PTP4A3O75365 AC110994.2-201ENST00000635481 492 ntBASIC3.29□□□□□ -1.88
PTP4A3O75365 AP000553.6-201ENST00000641242 118 ntBASIC3.29□□□□□ -1.88
PTP4A3O75365 GABRG2-229ENST00000641017 3628 ntBASIC3.29□□□□□ -1.88
PTP4A3O75365 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PTP4A3O75365 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.29□□□□□ -1.88
PTP4A3O75365 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
PTP4A3O75365 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
PTP4A3O75365 AC099654.7-201ENST00000635788 2127 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
PTP4A3O75365 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PTP4A3O75365 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PTP4A3O75365 U8.3-201ENST00000363321 132 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 SNORD116-2-201ENST00000384274 95 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 SNORD116-6-201ENST00000384711 96 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PTP4A3O75365 TRIAP1P1-201ENST00000427062 225 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 AC091390.1-201ENST00000433904 331 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.28□□□□□ -1.88
PTP4A3O75365 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PTP4A3O75365 Z83846.1-201ENST00000446798 265 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.28□□□□□ -1.88
PTP4A3O75365 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.28□□□□□ -1.88
PTP4A3O75365 MRPS31P2-201ENST00000451581 518 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 CECR9-201ENST00000453421 199 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 RPL26P9-201ENST00000457466 433 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 RPL7P5-201ENST00000471472 736 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.28□□□□□ -1.88
PTP4A3O75365 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.28□□□□□ -1.88
PTP4A3O75365 AC114786.4-201ENST00000508771 728 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.28□□□□□ -1.88
PTP4A3O75365 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.28□□□□□ -1.88
PTP4A3O75365 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.28□□□□□ -1.88
PTP4A3O75365 RNA5SP471-201ENST00000516971 106 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 DUXAP2-201ENST00000519198 589 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.28□□□□□ -1.88
PTP4A3O75365 HMGB1P41-201ENST00000520234 440 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.28□□□□□ -1.88
PTP4A3O75365 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PTP4A3O75365 AL356057.1-201ENST00000533798 831 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 AP000873.5-201ENST00000533906 236 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 NACAP3-201ENST00000552100 481 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 AL391261.3-201ENST00000557194 520 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 NCAPGP2-201ENST00000557911 754 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.28□□□□□ -1.88
PTP4A3O75365 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PTP4A3O75365 AC110760.3-201ENST00000598794 467 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 BNIP3P9-201ENST00000603714 553 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 AL358072.1-201ENST00000604156 575 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 AL355598.1-201ENST00000604169 202 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 AC006077.1-201ENST00000604746 343 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 AC007619.2-201ENST00000605743 379 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 AC087752.4-201ENST00000605911 462 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 AL161734.1-201ENST00000609720 557 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 AC109347.2-201ENST00000610220 349 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 AC068831.8-201ENST00000620171 435 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.28□□□□□ -1.88
PTP4A3O75365 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.28□□□□□ -1.88
PTP4A3O75365 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
PTP4A3O75365 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PTP4A3O75365 AC058791.1-201ENST00000608412 3198 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PTP4A3O75365 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PTP4A3O75365 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PTP4A3O75365 AP003122.5-201ENST00000527668 3766 ntBASIC3.28□□□□□ -1.88
PTP4A3O75365 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PTP4A3O75365 AC068647.1-201ENST00000489539 2265 ntBASIC3.27□□□□□ -1.89
PTP4A3O75365 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
PTP4A3O75365 RNU6-884P-201ENST00000363889 107 ntBASIC3.27□□□□□ -1.89
PTP4A3O75365 RNU6-512P-201ENST00000364438 103 ntBASIC3.27□□□□□ -1.89
PTP4A3O75365 SNORD116-9-201ENST00000384000 95 ntBASIC3.27□□□□□ -1.89
PTP4A3O75365 SNORD116-3-201ENST00000384287 95 ntBASIC3.27□□□□□ -1.89
PTP4A3O75365 SNORD116-7-201ENST00000384404 95 ntBASIC3.27□□□□□ -1.89
PTP4A3O75365 SNORD116-5-201ENST00000384462 95 ntBASIC3.27□□□□□ -1.89
PTP4A3O75365 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PTP4A3O75365 AL136116.1-201ENST00000403591 381 ntBASIC3.27□□□□□ -1.89
PTP4A3O75365 U3.39-201ENST00000408569 239 ntBASIC3.27□□□□□ -1.89
PTP4A3O75365 RNA5SP293-201ENST00000410527 113 ntBASIC3.27□□□□□ -1.89
PTP4A3O75365 RNU6-628P-201ENST00000410675 107 ntBASIC3.27□□□□□ -1.89
PTP4A3O75365 NDUFS5P4-201ENST00000412983 318 ntBASIC3.27□□□□□ -1.89
PTP4A3O75365 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.27□□□□□ -1.89
PTP4A3O75365 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.27□□□□□ -1.89
PTP4A3O75365 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.27□□□□□ -1.89
PTP4A3O75365 HMGB1P9-201ENST00000429856 646 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms