Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.99□□□□□ -1.45
RNF40O75150 AL139099.4-201ENST00000614802 114 ntBASIC5.99□□□□□ -1.45
RNF40O75150 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.99□□□□□ -1.45
RNF40O75150 CU639417.4-201ENST00000623928 207 ntBASIC5.99□□□□□ -1.45
RNF40O75150 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
RNF40O75150 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RNF40O75150 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.99□□□□□ -1.45
RNF40O75150 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
RNF40O75150 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.99□□□□□ -1.45
RNF40O75150 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RNF40O75150 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.99□□□□□ -1.45
RNF40O75150 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
RNF40O75150 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
RNF40O75150 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RNF40O75150 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RNF40O75150 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
RNF40O75150 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RNF40O75150 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RNF40O75150 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
RNF40O75150 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
RNF40O75150 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RNF40O75150 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.98□□□□□ -1.45
RNF40O75150 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RNF40O75150 MIR410-201ENST00000362222 80 ntBASIC5.98□□□□□ -1.45
RNF40O75150 RNU6-222P-201ENST00000362438 107 ntBASIC5.98□□□□□ -1.45
RNF40O75150 RNA5SP52-201ENST00000362448 134 ntBASIC5.98□□□□□ -1.45
RNF40O75150 RNU4-84P-201ENST00000364200 139 ntBASIC5.98□□□□□ -1.45
RNF40O75150 RN7SKP124-201ENST00000364730 341 ntBASIC5.98□□□□□ -1.45
RNF40O75150 RNU6-514P-201ENST00000384208 107 ntBASIC5.98□□□□□ -1.45
RNF40O75150 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
RNF40O75150 RNU6-821P-201ENST00000390995 107 ntBASIC5.98□□□□□ -1.45
RNF40O75150 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.98□□□□□ -1.45
RNF40O75150 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC5.98□□□□□ -1.45
RNF40O75150 RN7SL72P-201ENST00000460697 269 ntBASIC5.98□□□□□ -1.45
RNF40O75150 AC073901.1-201ENST00000462471 408 ntBASIC5.98□□□□□ -1.45
RNF40O75150 RN7SL184P-201ENST00000488308 297 ntBASIC5.98□□□□□ -1.45
RNF40O75150 RNU6-615P-201ENST00000516065 106 ntBASIC5.98□□□□□ -1.45
RNF40O75150 MIR2117-201ENST00000516780 80 ntBASIC5.98□□□□□ -1.45
RNF40O75150 AC067852.4-201ENST00000590314 478 ntBASIC5.98□□□□□ -1.45
RNF40O75150 SRGNP1-201ENST00000603392 451 ntBASIC5.98□□□□□ -1.45
RNF40O75150 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RNF40O75150 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
RNF40O75150 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RNF40O75150 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.98□□□□□ -1.45
RNF40O75150 RAD17P1-201ENST00000418130 2042 ntBASIC5.98□□□□□ -1.45
RNF40O75150 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.97□□□□□ -1.45
RNF40O75150 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.97□□□□□ -1.45
RNF40O75150 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
RNF40O75150 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RNF40O75150 PABPC1P6-201ENST00000445594 1829 ntBASIC5.97□□□□□ -1.45
RNF40O75150 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RNF40O75150 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.97□□□□□ -1.45
RNF40O75150 SNORA58B-201ENST00000364259 136 ntBASIC5.97□□□□□ -1.45
RNF40O75150 Y_RNA.262-201ENST00000364641 102 ntBASIC5.97□□□□□ -1.45
RNF40O75150 AL357139.1-201ENST00000407792 426 ntBASIC5.97□□□□□ -1.45
RNF40O75150 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.97□□□□□ -1.45
RNF40O75150 AC099677.3-201ENST00000427081 395 ntBASIC5.97□□□□□ -1.45
RNF40O75150 RAB28P5-201ENST00000427490 651 ntBASIC5.97□□□□□ -1.45
RNF40O75150 HMGB1P27-201ENST00000431429 603 ntBASIC5.97□□□□□ -1.45
RNF40O75150 AC004129.2-201ENST00000457229 287 ntBASIC5.97□□□□□ -1.45
RNF40O75150 AC005840.1-201ENST00000498412 377 ntBASIC5.97□□□□□ -1.45
RNF40O75150 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.97□□□□□ -1.45
RNF40O75150 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC5.97□□□□□ -1.45
RNF40O75150 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.97□□□□□ -1.45
RNF40O75150 BX510359.5-201ENST00000515651 304 ntBASIC5.97□□□□□ -1.45
RNF40O75150 RNU6-1315P-201ENST00000517187 99 ntBASIC5.97□□□□□ -1.45
RNF40O75150 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.97□□□□□ -1.45
RNF40O75150 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.97□□□□□ -1.45
RNF40O75150 AC103996.1-201ENST00000555468 102 ntBASIC5.97□□□□□ -1.45
RNF40O75150 RPL21P9-201ENST00000556149 474 ntBASIC5.97□□□□□ -1.45
RNF40O75150 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC5.97□□□□□ -1.45
RNF40O75150 MIR1269B-201ENST00000580405 75 ntBASIC5.97□□□□□ -1.45
RNF40O75150 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.97□□□□□ -1.45
RNF40O75150 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC5.97□□□□□ -1.45
RNF40O75150 Z99571.1-201ENST00000636677 394 ntBASIC5.97□□□□□ -1.45
RNF40O75150 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RNF40O75150 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.97□□□□□ -1.45
RNF40O75150 ADAM5-202ENST00000399789 1942 ntBASIC5.97□□□□□ -1.45
RNF40O75150 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.97□□□□□ -1.45
RNF40O75150 AC010332.2-201ENST00000613083 1904 ntBASIC5.97□□□□□ -1.45
RNF40O75150 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RNF40O75150 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
RNF40O75150 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RNF40O75150 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
RNF40O75150 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
RNF40O75150 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
RNF40O75150 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
RNF40O75150 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
RNF40O75150 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
RNF40O75150 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.96□□□□□ -1.45
RNF40O75150 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
RNF40O75150 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
RNF40O75150 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
RNF40O75150 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RNF40O75150 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.96□□□□□ -1.46
RNF40O75150 Y_RNA.71-201ENST00000362892 104 ntBASIC5.96□□□□□ -1.46
RNF40O75150 RNU6-1155P-201ENST00000363554 107 ntBASIC5.96□□□□□ -1.46
RNF40O75150 SNORA74A-201ENST00000364089 198 ntBASIC5.96□□□□□ -1.46
RNF40O75150 Y_RNA.217-201ENST00000364214 105 ntBASIC5.96□□□□□ -1.46
RNF40O75150 Y_RNA.571-201ENST00000384753 98 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms