Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.26□□□□□ -2.05
SHOX2O60902 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
SHOX2O60902 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SHOX2O60902 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.26□□□□□ -2.05
SHOX2O60902 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.26□□□□□ -2.05
SHOX2O60902 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.26□□□□□ -2.05
SHOX2O60902 AC044913.1-201ENST00000557200 430 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.26□□□□□ -2.05
SHOX2O60902 AC090616.3-201ENST00000582184 217 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 AL022067.1-201ENST00000602426 454 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 RPAP2P1-201ENST00000603626 1168 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 AL035411.2-201ENST00000604022 421 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 DUXAP10-204ENST00000612052 616 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 AC093591.3-201ENST00000634516 308 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 OR5H6-203ENST00000642105 978 ntBASIC2.26□□□□□ -2.05
SHOX2O60902 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.26□□□□□ -2.05
SHOX2O60902 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SHOX2O60902 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.26□□□□□ -2.05
SHOX2O60902 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.25□□□□□ -2.05
SHOX2O60902 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
SHOX2O60902 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.25□□□□□ -2.05
SHOX2O60902 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SHOX2O60902 AL589826.1-201ENST00000340697 249 ntBASIC2.25□□□□□ -2.05
SHOX2O60902 RNA5SP160-201ENST00000364866 120 ntBASIC2.25□□□□□ -2.05
SHOX2O60902 SNORA6-201ENST00000384033 151 ntBASIC2.25□□□□□ -2.05
SHOX2O60902 MIR34A-201ENST00000385130 110 ntBASIC2.25□□□□□ -2.05
SHOX2O60902 AL356131.1-201ENST00000405826 414 ntBASIC2.25□□□□□ -2.05
SHOX2O60902 CCDC58P2-201ENST00000417131 366 ntBASIC2.25□□□□□ -2.05
SHOX2O60902 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.25□□□□□ -2.05
SHOX2O60902 AL358075.3-201ENST00000426289 226 ntBASIC2.25□□□□□ -2.05
SHOX2O60902 MTCYBP32-201ENST00000427945 1084 ntBASIC2.25□□□□□ -2.05
SHOX2O60902 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.25□□□□□ -2.05
SHOX2O60902 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.25□□□□□ -2.05
SHOX2O60902 AL714022.1-201ENST00000439897 151 ntBASIC2.25□□□□□ -2.05
SHOX2O60902 RPL26P6-201ENST00000440913 438 ntBASIC2.25□□□□□ -2.05
SHOX2O60902 AC116337.2-201ENST00000477662 156 ntBASIC2.25□□□□□ -2.05
SHOX2O60902 AC025768.1-201ENST00000510057 267 ntBASIC2.25□□□□□ -2.05
SHOX2O60902 HMGB3P3-201ENST00000510526 400 ntBASIC2.25□□□□□ -2.05
SHOX2O60902 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
SHOX2O60902 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SHOX2O60902 AC090888.1-201ENST00000561335 1141 ntBASIC2.25□□□□□ -2.05
SHOX2O60902 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.25□□□□□ -2.05
SHOX2O60902 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.25□□□□□ -2.05
SHOX2O60902 LARP7P2-201ENST00000575306 125 ntBASIC2.25□□□□□ -2.05
SHOX2O60902 DUXAP11-201ENST00000603858 526 ntBASIC2.25□□□□□ -2.05
SHOX2O60902 AC103810.6-201ENST00000606708 136 ntBASIC2.25□□□□□ -2.05
SHOX2O60902 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.25□□□□□ -2.05
SHOX2O60902 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.25□□□□□ -2.05
SHOX2O60902 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.25□□□□□ -2.05
SHOX2O60902 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SHOX2O60902 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
SHOX2O60902 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SHOX2O60902 AL109809.4-201ENST00000603520 2185 ntBASIC2.25□□□□□ -2.05
SHOX2O60902 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.24□□□□□ -2.05
SHOX2O60902 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SHOX2O60902 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.24□□□□□ -2.05
SHOX2O60902 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
SHOX2O60902 RNU5A-1-201ENST00000362698 116 ntBASIC2.24□□□□□ -2.05
SHOX2O60902 MIR506-201ENST00000384998 124 ntBASIC2.24□□□□□ -2.05
SHOX2O60902 MIR518E-201ENST00000385252 88 ntBASIC2.24□□□□□ -2.05
SHOX2O60902 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.24□□□□□ -2.05
SHOX2O60902 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.24□□□□□ -2.05
SHOX2O60902 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.24□□□□□ -2.05
SHOX2O60902 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.24□□□□□ -2.05
SHOX2O60902 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.24□□□□□ -2.05
SHOX2O60902 THAP5P1-201ENST00000439089 262 ntBASIC2.24□□□□□ -2.05
SHOX2O60902 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.24□□□□□ -2.05
SHOX2O60902 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.24□□□□□ -2.05
SHOX2O60902 AC108938.1-201ENST00000451204 136 ntBASIC2.24□□□□□ -2.05
SHOX2O60902 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.24□□□□□ -2.05
SHOX2O60902 AC090515.1-201ENST00000465295 476 ntBASIC2.24□□□□□ -2.05
SHOX2O60902 AC092757.1-201ENST00000467293 467 ntBASIC2.24□□□□□ -2.05
SHOX2O60902 AC147055.4-201ENST00000504399 745 ntBASIC2.24□□□□□ -2.05
SHOX2O60902 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.24□□□□□ -2.05
SHOX2O60902 AC010460.2-201ENST00000509054 677 ntBASIC2.24□□□□□ -2.05
SHOX2O60902 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.24□□□□□ -2.05
SHOX2O60902 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.24□□□□□ -2.05
SHOX2O60902 RNU1-40P-201ENST00000516816 164 ntBASIC2.24□□□□□ -2.05
SHOX2O60902 RNU1-97P-201ENST00000516872 164 ntBASIC2.24□□□□□ -2.05
SHOX2O60902 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.24□□□□□ -2.05
SHOX2O60902 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SHOX2O60902 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.24□□□□□ -2.05
SHOX2O60902 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.24□□□□□ -2.05
SHOX2O60902 MIR5007-201ENST00000583098 95 ntBASIC2.24□□□□□ -2.05
SHOX2O60902 OR1M4P-201ENST00000589199 287 ntBASIC2.24□□□□□ -2.05
SHOX2O60902 AC005498.1-201ENST00000592125 465 ntBASIC2.24□□□□□ -2.05
SHOX2O60902 AP000238.1-201ENST00000608759 426 ntBASIC2.24□□□□□ -2.05
SHOX2O60902 AP005137.2-201ENST00000609238 400 ntBASIC2.24□□□□□ -2.05
SHOX2O60902 AC009831.4-201ENST00000620744 325 ntBASIC2.24□□□□□ -2.05
SHOX2O60902 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.24□□□□□ -2.05
SHOX2O60902 AC010872.1-201ENST00000624225 675 ntBASIC2.24□□□□□ -2.05
SHOX2O60902 AP003399.1-201ENST00000637534 361 ntBASIC2.24□□□□□ -2.05
SHOX2O60902 U6.101-201ENST00000637707 76 ntBASIC2.24□□□□□ -2.05
SHOX2O60902 AC241585.2-209ENST00000638217 143 ntBASIC2.24□□□□□ -2.05
SHOX2O60902 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.24□□□□□ -2.05
SHOX2O60902 AC005832.2-201ENST00000538921 1430 ntBASIC2.24□□□□□ -2.05
SHOX2O60902 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.23□□□□□ -2.05
SHOX2O60902 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.23□□□□□ -2.05
SHOX2O60902 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SHOX2O60902 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms