Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.57□□□□□ -2
BRD4O60885 AC025755.1-201ENST00000521306 278 ntBASIC2.57□□□□□ -2
BRD4O60885 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.57□□□□□ -2
BRD4O60885 AC010546.1-201ENST00000569391 485 ntBASIC2.57□□□□□ -2
BRD4O60885 AC011260.1-201ENST00000578420 472 ntBASIC2.57□□□□□ -2
BRD4O60885 CBX3P2-202ENST00000583365 535 ntBASIC2.57□□□□□ -2
BRD4O60885 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.57□□□□□ -2
BRD4O60885 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.57□□□□□ -2
BRD4O60885 AC242628.1-201ENST00000606810 391 ntBASIC2.57□□□□□ -2
BRD4O60885 AC017104.5-201ENST00000637647 639 ntBASIC2.57□□□□□ -2
BRD4O60885 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.57□□□□□ -2
BRD4O60885 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
BRD4O60885 HMGB1P5-201ENST00000255320 642 ntBASIC2.56□□□□□ -2
BRD4O60885 MIR1294-201ENST00000408503 142 ntBASIC2.56□□□□□ -2
BRD4O60885 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
BRD4O60885 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.56□□□□□ -2
BRD4O60885 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.56□□□□□ -2
BRD4O60885 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.56□□□□□ -2
BRD4O60885 AC003989.2-201ENST00000440224 169 ntBASIC2.56□□□□□ -2
BRD4O60885 COX6CP12-201ENST00000446748 202 ntBASIC2.56□□□□□ -2
BRD4O60885 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.56□□□□□ -2
BRD4O60885 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.56□□□□□ -2
BRD4O60885 CBX3P3-201ENST00000508108 532 ntBASIC2.56□□□□□ -2
BRD4O60885 RNU6-250P-201ENST00000516958 103 ntBASIC2.56□□□□□ -2
BRD4O60885 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.56□□□□□ -2
BRD4O60885 SUB1P3-201ENST00000564581 315 ntBASIC2.56□□□□□ -2
BRD4O60885 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC2.56□□□□□ -2
BRD4O60885 AC005498.1-201ENST00000592125 465 ntBASIC2.56□□□□□ -2
BRD4O60885 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.56□□□□□ -2
BRD4O60885 AL356118.1-201ENST00000635272 1078 ntBASIC2.56□□□□□ -2
BRD4O60885 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
BRD4O60885 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
BRD4O60885 SNORA68.1-201ENST00000364537 132 ntBASIC2.55□□□□□ -2
BRD4O60885 SNORA67.5-201ENST00000391036 107 ntBASIC2.55□□□□□ -2
BRD4O60885 RNU4-72P-201ENST00000410754 173 ntBASIC2.55□□□□□ -2
BRD4O60885 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.55□□□□□ -2
BRD4O60885 RPS15AP12-201ENST00000419498 388 ntBASIC2.55□□□□□ -2
BRD4O60885 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.55□□□□□ -2
BRD4O60885 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.55□□□□□ -2
BRD4O60885 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.55□□□□□ -2
BRD4O60885 AC079780.1-201ENST00000428259 207 ntBASIC2.55□□□□□ -2
BRD4O60885 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.55□□□□□ -2
BRD4O60885 TRIM60P13-201ENST00000432350 1283 ntBASIC2.55□□□□□ -2
BRD4O60885 snoU13.18-201ENST00000459483 104 ntBASIC2.55□□□□□ -2
BRD4O60885 AC087588.1-201ENST00000462203 316 ntBASIC2.55□□□□□ -2
BRD4O60885 AC104564.1-201ENST00000493028 407 ntBASIC2.55□□□□□ -2
BRD4O60885 MTCO1P31-201ENST00000506355 492 ntBASIC2.55□□□□□ -2
BRD4O60885 RNU6-202P-201ENST00000515998 96 ntBASIC2.55□□□□□ -2
BRD4O60885 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.55□□□□□ -2
BRD4O60885 HAUS1P3-201ENST00000523909 662 ntBASIC2.55□□□□□ -2
BRD4O60885 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.55□□□□□ -2
BRD4O60885 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.55□□□□□ -2
BRD4O60885 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.55□□□□□ -2
BRD4O60885 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.55□□□□□ -2
BRD4O60885 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.55□□□□□ -2
BRD4O60885 KATNBL1P1-201ENST00000605192 748 ntBASIC2.55□□□□□ -2
BRD4O60885 AC073968.1-201ENST00000618594 637 ntBASIC2.55□□□□□ -2
BRD4O60885 AC084768.2-201ENST00000622736 221 ntBASIC2.55□□□□□ -2
BRD4O60885 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.55□□□□□ -2
BRD4O60885 BX649567.1-201ENST00000642071 1134 ntBASIC2.55□□□□□ -2
BRD4O60885 AC009902.3-201ENST00000606235 2172 ntBASIC2.55□□□□□ -2
BRD4O60885 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.55□□□□□ -2
BRD4O60885 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.55□□□□□ -2
BRD4O60885 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
BRD4O60885 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
BRD4O60885 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
BRD4O60885 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
BRD4O60885 MIR767-201ENST00000390228 109 ntBASIC2.54□□□□□ -2
BRD4O60885 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.54□□□□□ -2
BRD4O60885 SUMO2P12-201ENST00000405924 140 ntBASIC2.54□□□□□ -2
BRD4O60885 AC092745.2-202ENST00000411880 369 ntBASIC2.54□□□□□ -2
BRD4O60885 AP1B1P2-201ENST00000416196 106 ntBASIC2.54□□□□□ -2
BRD4O60885 AC009296.1-201ENST00000443146 155 ntBASIC2.54□□□□□ -2
BRD4O60885 MTCO1P42-201ENST00000457379 726 ntBASIC2.54□□□□□ -2
BRD4O60885 TRMT112P2-201ENST00000512910 132 ntBASIC2.54□□□□□ -2
BRD4O60885 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.54□□□□□ -2
BRD4O60885 MIR4658-201ENST00000584344 65 ntBASIC2.54□□□□□ -2
BRD4O60885 AP005137.2-201ENST00000609238 400 ntBASIC2.54□□□□□ -2
BRD4O60885 AC020658.4-201ENST00000613987 684 ntBASIC2.54□□□□□ -2
BRD4O60885 AC079395.3-201ENST00000615161 484 ntBASIC2.54□□□□□ -2
BRD4O60885 AL590099.1-201ENST00000615276 138 ntBASIC2.54□□□□□ -2
BRD4O60885 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.54□□□□□ -2
BRD4O60885 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.54□□□□□ -2
BRD4O60885 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
BRD4O60885 RNU6-441P-201ENST00000384545 106 ntBASIC2.53□□□□□ -2
BRD4O60885 RNU6-883P-201ENST00000384597 107 ntBASIC2.53□□□□□ -2
BRD4O60885 AL136372.1-201ENST00000403060 228 ntBASIC2.53□□□□□ -2
BRD4O60885 AP000275.1-201ENST00000411943 390 ntBASIC2.53□□□□□ -2
BRD4O60885 AC007560.1-201ENST00000426912 237 ntBASIC2.53□□□□□ -2
BRD4O60885 UBE2V1P13-201ENST00000436983 439 ntBASIC2.53□□□□□ -2
BRD4O60885 RPS15AP27-201ENST00000449183 343 ntBASIC2.53□□□□□ -2
BRD4O60885 AC140059.1-201ENST00000489238 361 ntBASIC2.53□□□□□ -2
BRD4O60885 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.53□□□□□ -2
BRD4O60885 NDUFB4P2-201ENST00000509515 391 ntBASIC2.53□□□□□ -2
BRD4O60885 AC011611.5-201ENST00000552477 578 ntBASIC2.53□□□□□ -2
BRD4O60885 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.53□□□□□ -2
BRD4O60885 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
BRD4O60885 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.53□□□□□ -2
BRD4O60885 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
BRD4O60885 RNU6-40P-201ENST00000384254 107 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms