Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.22□□□□□ -2.21
SSSCA1O60232 MIR4672-201ENST00000583126 81 ntBASIC1.22□□□□□ -2.21
SSSCA1O60232 AC243960.4-201ENST00000600532 288 ntBASIC1.22□□□□□ -2.21
SSSCA1O60232 AP000254.1-201ENST00000609934 520 ntBASIC1.22□□□□□ -2.21
SSSCA1O60232 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
SSSCA1O60232 RNU6-1159P-201ENST00000362933 107 ntBASIC1.21□□□□□ -2.22
SSSCA1O60232 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC1.21□□□□□ -2.22
SSSCA1O60232 RNA5SP508-201ENST00000411327 119 ntBASIC1.21□□□□□ -2.22
SSSCA1O60232 VN1R36P-201ENST00000414936 291 ntBASIC1.21□□□□□ -2.22
SSSCA1O60232 RPS3AP9-201ENST00000417027 792 ntBASIC1.21□□□□□ -2.22
SSSCA1O60232 AC074117.2-201ENST00000417130 397 ntBASIC1.21□□□□□ -2.22
SSSCA1O60232 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC1.21□□□□□ -2.22
SSSCA1O60232 AL353729.1-201ENST00000425044 720 ntBASIC1.21□□□□□ -2.22
SSSCA1O60232 RPS3AP44-201ENST00000425466 790 ntBASIC1.21□□□□□ -2.22
SSSCA1O60232 VN1R108P-201ENST00000431580 830 ntBASIC1.21□□□□□ -2.22
SSSCA1O60232 AL392003.1-201ENST00000434394 243 ntBASIC1.21□□□□□ -2.22
SSSCA1O60232 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.21□□□□□ -2.22
SSSCA1O60232 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.21□□□□□ -2.22
SSSCA1O60232 SSXP1-201ENST00000453640 473 ntBASIC1.21□□□□□ -2.22
SSSCA1O60232 AL049873.1-201ENST00000480540 376 ntBASIC1.21□□□□□ -2.22
SSSCA1O60232 AC021146.2-201ENST00000504736 556 ntBASIC1.21□□□□□ -2.22
SSSCA1O60232 AC011352.3-201ENST00000505162 593 ntBASIC1.21□□□□□ -2.22
SSSCA1O60232 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.21□□□□□ -2.22
SSSCA1O60232 AC017037.2-201ENST00000513850 890 ntBASIC1.21□□□□□ -2.22
SSSCA1O60232 RNU6-250P-201ENST00000516958 103 ntBASIC1.21□□□□□ -2.22
SSSCA1O60232 SCARNA11.3-201ENST00000517276 130 ntBASIC1.21□□□□□ -2.22
SSSCA1O60232 AP004607.1-201ENST00000524456 203 ntBASIC1.21□□□□□ -2.22
SSSCA1O60232 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.21□□□□□ -2.22
SSSCA1O60232 AC010615.3-201ENST00000597319 394 ntBASIC1.21□□□□□ -2.22
SSSCA1O60232 AL590410.1-201ENST00000617925 333 ntBASIC1.21□□□□□ -2.22
SSSCA1O60232 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC1.21□□□□□ -2.22
SSSCA1O60232 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.21□□□□□ -2.22
SSSCA1O60232 AC008568.2-201ENST00000623862 2313 ntBASIC1.2□□□□□ -2.22
SSSCA1O60232 MIR126-201ENST00000362291 85 ntBASIC1.2□□□□□ -2.22
SSSCA1O60232 RNA5SP125-201ENST00000364843 120 ntBASIC1.2□□□□□ -2.22
SSSCA1O60232 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.2□□□□□ -2.22
SSSCA1O60232 RN7SKP158-201ENST00000410453 326 ntBASIC1.2□□□□□ -2.22
SSSCA1O60232 RNU6-955P-201ENST00000410497 104 ntBASIC1.2□□□□□ -2.22
SSSCA1O60232 RPS7P9-201ENST00000414704 586 ntBASIC1.2□□□□□ -2.22
SSSCA1O60232 AC007098.1-201ENST00000420122 367 ntBASIC1.2□□□□□ -2.22
SSSCA1O60232 RPL27AP8-201ENST00000424277 446 ntBASIC1.2□□□□□ -2.22
SSSCA1O60232 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.2□□□□□ -2.22
SSSCA1O60232 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.2□□□□□ -2.22
SSSCA1O60232 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.2□□□□□ -2.22
SSSCA1O60232 RPL7P36-201ENST00000444633 681 ntBASIC1.2□□□□□ -2.22
SSSCA1O60232 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.2□□□□□ -2.22
SSSCA1O60232 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.2□□□□□ -2.22
SSSCA1O60232 C1DP3-201ENST00000455013 423 ntBASIC1.2□□□□□ -2.22
SSSCA1O60232 AC140059.1-201ENST00000489238 361 ntBASIC1.2□□□□□ -2.22
SSSCA1O60232 RPL30P5-201ENST00000494923 336 ntBASIC1.2□□□□□ -2.22
SSSCA1O60232 SUMO2P6-201ENST00000505273 288 ntBASIC1.2□□□□□ -2.22
SSSCA1O60232 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.2□□□□□ -2.22
SSSCA1O60232 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.2□□□□□ -2.22
SSSCA1O60232 RNA5SP61-201ENST00000516453 100 ntBASIC1.2□□□□□ -2.22
SSSCA1O60232 AC027309.2-201ENST00000520566 192 ntBASIC1.2□□□□□ -2.22
SSSCA1O60232 AC118273.2-201ENST00000532092 465 ntBASIC1.2□□□□□ -2.22
SSSCA1O60232 AC010186.2-204ENST00000537668 439 ntBASIC1.2□□□□□ -2.22
SSSCA1O60232 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.2□□□□□ -2.22
SSSCA1O60232 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.2□□□□□ -2.22
SSSCA1O60232 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.2□□□□□ -2.22
SSSCA1O60232 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.2□□□□□ -2.22
SSSCA1O60232 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.2□□□□□ -2.22
SSSCA1O60232 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.2□□□□□ -2.22
SSSCA1O60232 AC135803.1-201ENST00000608748 565 ntBASIC1.2□□□□□ -2.22
SSSCA1O60232 MIR7974-201ENST00000615835 79 ntBASIC1.2□□□□□ -2.22
SSSCA1O60232 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.2□□□□□ -2.22
SSSCA1O60232 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.2□□□□□ -2.22
SSSCA1O60232 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.2□□□□□ -2.22
SSSCA1O60232 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
SSSCA1O60232 MTND4LP20-201ENST00000402379 270 ntBASIC1.19□□□□□ -2.22
SSSCA1O60232 MIR1323-201ENST00000408090 73 ntBASIC1.19□□□□□ -2.22
SSSCA1O60232 RN7SKP192-201ENST00000411291 327 ntBASIC1.19□□□□□ -2.22
SSSCA1O60232 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC1.19□□□□□ -2.22
SSSCA1O60232 Z93242.1-201ENST00000427102 353 ntBASIC1.19□□□□□ -2.22
SSSCA1O60232 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.19□□□□□ -2.22
SSSCA1O60232 RPS26P30-201ENST00000443431 335 ntBASIC1.19□□□□□ -2.22
SSSCA1O60232 AC233982.1-201ENST00000451247 436 ntBASIC1.19□□□□□ -2.22
SSSCA1O60232 AMD1P1-201ENST00000457220 922 ntBASIC1.19□□□□□ -2.22
SSSCA1O60232 RNU6-420P-201ENST00000458780 107 ntBASIC1.19□□□□□ -2.22
SSSCA1O60232 WWP1P1-201ENST00000466609 2769 ntBASIC1.19□□□□□ -2.22
SSSCA1O60232 AC087884.1-201ENST00000469738 328 ntBASIC1.19□□□□□ -2.22
SSSCA1O60232 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.19□□□□□ -2.22
SSSCA1O60232 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SSSCA1O60232 SNORD116-30-201ENST00000516468 85 ntBASIC1.19□□□□□ -2.22
SSSCA1O60232 RNU6-798P-201ENST00000516912 103 ntBASIC1.19□□□□□ -2.22
SSSCA1O60232 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.19□□□□□ -2.22
SSSCA1O60232 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
SSSCA1O60232 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
SSSCA1O60232 CBX3P7-201ENST00000532876 502 ntBASIC1.19□□□□□ -2.22
SSSCA1O60232 AK6P1-201ENST00000540219 478 ntBASIC1.19□□□□□ -2.22
SSSCA1O60232 MTCYBP23-201ENST00000558717 1102 ntBASIC1.19□□□□□ -2.22
SSSCA1O60232 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.19□□□□□ -2.22
SSSCA1O60232 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.19□□□□□ -2.22
SSSCA1O60232 AC012443.1-201ENST00000605605 231 ntBASIC1.19□□□□□ -2.22
SSSCA1O60232 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.19□□□□□ -2.22
SSSCA1O60232 AC073968.1-201ENST00000618594 637 ntBASIC1.19□□□□□ -2.22
SSSCA1O60232 AC109454.4-201ENST00000623411 649 ntBASIC1.19□□□□□ -2.22
SSSCA1O60232 AC010872.1-201ENST00000624225 675 ntBASIC1.19□□□□□ -2.22
SSSCA1O60232 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.19□□□□□ -2.22
SSSCA1O60232 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms