Protein–RNA interactions for Protein: O43818

RRP9, U3 small nucleolar RNA-interacting protein 2, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9O43818 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RRP9O43818 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RRP9O43818 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.94□□□□□ -1.78
RRP9O43818 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.94□□□□□ -1.78
RRP9O43818 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RRP9O43818 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RRP9O43818 INTS6P1-201ENST00000504674 2530 ntBASIC3.93□□□□□ -1.78
RRP9O43818 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
RRP9O43818 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RRP9O43818 RNU6-534P-201ENST00000364877 106 ntBASIC3.93□□□□□ -1.78
RRP9O43818 Y_RNA.295-201ENST00000364918 102 ntBASIC3.93□□□□□ -1.78
RRP9O43818 RNU5E-6P-201ENST00000365574 115 ntBASIC3.93□□□□□ -1.78
RRP9O43818 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RRP9O43818 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.93□□□□□ -1.78
RRP9O43818 RNU6-641P-201ENST00000384006 107 ntBASIC3.93□□□□□ -1.78
RRP9O43818 MIR607-201ENST00000385241 96 ntBASIC3.93□□□□□ -1.78
RRP9O43818 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RRP9O43818 AL354719.1-201ENST00000406535 843 ntBASIC3.93□□□□□ -1.78
RRP9O43818 Y_RNA.604-201ENST00000410574 102 ntBASIC3.93□□□□□ -1.78
RRP9O43818 AC022028.1-201ENST00000412054 408 ntBASIC3.93□□□□□ -1.78
RRP9O43818 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.93□□□□□ -1.78
RRP9O43818 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RRP9O43818 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.93□□□□□ -1.78
RRP9O43818 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.93□□□□□ -1.78
RRP9O43818 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.93□□□□□ -1.78
RRP9O43818 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.93□□□□□ -1.78
RRP9O43818 AC104332.2-201ENST00000429959 156 ntBASIC3.93□□□□□ -1.78
RRP9O43818 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.93□□□□□ -1.78
RRP9O43818 AC109327.1-201ENST00000471666 403 ntBASIC3.93□□□□□ -1.78
RRP9O43818 AC110792.1-201ENST00000491826 472 ntBASIC3.93□□□□□ -1.78
RRP9O43818 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.93□□□□□ -1.78
RRP9O43818 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
RRP9O43818 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.93□□□□□ -1.78
RRP9O43818 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.93□□□□□ -1.78
RRP9O43818 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.93□□□□□ -1.78
RRP9O43818 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.93□□□□□ -1.78
RRP9O43818 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.93□□□□□ -1.78
RRP9O43818 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.93□□□□□ -1.78
RRP9O43818 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.93□□□□□ -1.78
RRP9O43818 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.93□□□□□ -1.78
RRP9O43818 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.93□□□□□ -1.78
RRP9O43818 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.93□□□□□ -1.78
RRP9O43818 AL121992.2-201ENST00000606262 256 ntBASIC3.93□□□□□ -1.78
RRP9O43818 Mico1.1-201ENST00000611698 204 ntBASIC3.93□□□□□ -1.78
RRP9O43818 AL049539.1-201ENST00000611964 459 ntBASIC3.93□□□□□ -1.78
RRP9O43818 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.93□□□□□ -1.78
RRP9O43818 U6.42-201ENST00000618440 107 ntBASIC3.93□□□□□ -1.78
RRP9O43818 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.93□□□□□ -1.78
RRP9O43818 AC022149.2-201ENST00000621061 203 ntBASIC3.93□□□□□ -1.78
RRP9O43818 MIR6730-201ENST00000622213 67 ntBASIC3.93□□□□□ -1.78
RRP9O43818 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.93□□□□□ -1.78
RRP9O43818 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
RRP9O43818 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.93□□□□□ -1.78
RRP9O43818 AC073343.1-201ENST00000328239 651 ntBASIC3.92□□□□□ -1.78
RRP9O43818 Y_RNA.381-201ENST00000365666 102 ntBASIC3.92□□□□□ -1.78
RRP9O43818 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RRP9O43818 RNU6-877P-201ENST00000383868 107 ntBASIC3.92□□□□□ -1.78
RRP9O43818 RNU6-606P-201ENST00000384721 111 ntBASIC3.92□□□□□ -1.78
RRP9O43818 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RRP9O43818 AC110754.1-201ENST00000399740 601 ntBASIC3.92□□□□□ -1.78
RRP9O43818 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.92□□□□□ -1.78
RRP9O43818 AL359634.1-202ENST00000404721 284 ntBASIC3.92□□□□□ -1.78
RRP9O43818 RNU2-39P-201ENST00000410604 198 ntBASIC3.92□□□□□ -1.78
RRP9O43818 COX6B1P1-201ENST00000415962 213 ntBASIC3.92□□□□□ -1.78
RRP9O43818 TOMM22P1-201ENST00000418578 312 ntBASIC3.92□□□□□ -1.78
RRP9O43818 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.92□□□□□ -1.78
RRP9O43818 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.92□□□□□ -1.78
RRP9O43818 AC079780.1-201ENST00000428259 207 ntBASIC3.92□□□□□ -1.78
RRP9O43818 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.92□□□□□ -1.78
RRP9O43818 OR4C10P-201ENST00000434991 931 ntBASIC3.92□□□□□ -1.78
RRP9O43818 MTCO3P18-201ENST00000440206 761 ntBASIC3.92□□□□□ -1.78
RRP9O43818 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.92□□□□□ -1.78
RRP9O43818 DDX3P2-201ENST00000446138 111 ntBASIC3.92□□□□□ -1.78
RRP9O43818 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.92□□□□□ -1.78
RRP9O43818 RNU7-63P-201ENST00000459054 62 ntBASIC3.92□□□□□ -1.78
RRP9O43818 RNU6-261P-201ENST00000459506 102 ntBASIC3.92□□□□□ -1.78
RRP9O43818 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.92□□□□□ -1.78
RRP9O43818 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RRP9O43818 HMGB1P22-201ENST00000505315 124 ntBASIC3.92□□□□□ -1.78
RRP9O43818 MLLT10P2-201ENST00000506434 249 ntBASIC3.92□□□□□ -1.78
RRP9O43818 KLHL2P1-201ENST00000508691 521 ntBASIC3.92□□□□□ -1.78
RRP9O43818 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.92□□□□□ -1.78
RRP9O43818 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.92□□□□□ -1.78
RRP9O43818 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.92□□□□□ -1.78
RRP9O43818 AL110118.1-201ENST00000553543 400 ntBASIC3.92□□□□□ -1.78
RRP9O43818 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.92□□□□□ -1.78
RRP9O43818 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.92□□□□□ -1.78
RRP9O43818 AC034105.3-201ENST00000565294 442 ntBASIC3.92□□□□□ -1.78
RRP9O43818 MIR548S-201ENST00000581352 82 ntBASIC3.92□□□□□ -1.78
RRP9O43818 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.92□□□□□ -1.78
RRP9O43818 AC090510.2-201ENST00000617465 629 ntBASIC3.92□□□□□ -1.78
RRP9O43818 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.92□□□□□ -1.78
RRP9O43818 FER-210ENST00000628534 558 ntTSL 5 BASIC3.92□□□□□ -1.78
RRP9O43818 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.92□□□□□ -1.78
RRP9O43818 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
RRP9O43818 AC068647.1-201ENST00000489539 2265 ntBASIC3.92□□□□□ -1.78
RRP9O43818 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
RRP9O43818 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
RRP9O43818 AL353743.1-202ENST00000431724 1695 ntBASIC3.91□□□□□ -1.78
RRP9O43818 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms