Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.82□□□□□ -1.48
HOXA2O43364 AC092754.1-201ENST00000472975 479 ntBASIC5.82□□□□□ -1.48
HOXA2O43364 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.82□□□□□ -1.48
HOXA2O43364 RPL7P47-201ENST00000497299 556 ntBASIC5.82□□□□□ -1.48
HOXA2O43364 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.82□□□□□ -1.48
HOXA2O43364 RNU6-346P-201ENST00000516288 111 ntBASIC5.82□□□□□ -1.48
HOXA2O43364 AC008694.2-201ENST00000517591 306 ntBASIC5.82□□□□□ -1.48
HOXA2O43364 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.82□□□□□ -1.48
HOXA2O43364 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXA2O43364 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.82□□□□□ -1.48
HOXA2O43364 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.82□□□□□ -1.48
HOXA2O43364 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.82□□□□□ -1.48
HOXA2O43364 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.82□□□□□ -1.48
HOXA2O43364 AC120057.2-201ENST00000571520 271 ntBASIC5.82□□□□□ -1.48
HOXA2O43364 AC060780.2-201ENST00000589047 198 ntBASIC5.82□□□□□ -1.48
HOXA2O43364 AC002545.1-201ENST00000592511 181 ntBASIC5.82□□□□□ -1.48
HOXA2O43364 AL162424.1-201ENST00000602325 221 ntBASIC5.82□□□□□ -1.48
HOXA2O43364 AC008121.1-201ENST00000603244 268 ntBASIC5.82□□□□□ -1.48
HOXA2O43364 SRGNP1-201ENST00000603392 451 ntBASIC5.82□□□□□ -1.48
HOXA2O43364 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.82□□□□□ -1.48
HOXA2O43364 AL161629.2-201ENST00000615347 275 ntBASIC5.82□□□□□ -1.48
HOXA2O43364 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXA2O43364 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
HOXA2O43364 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
HOXA2O43364 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HOXA2O43364 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.82□□□□□ -1.48
HOXA2O43364 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
HOXA2O43364 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HOXA2O43364 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HOXA2O43364 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.81□□□□□ -1.48
HOXA2O43364 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.81□□□□□ -1.48
HOXA2O43364 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HOXA2O43364 AC023421.1-201ENST00000590535 1785 ntBASIC5.81□□□□□ -1.48
HOXA2O43364 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.81□□□□□ -1.48
HOXA2O43364 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
HOXA2O43364 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
HOXA2O43364 RNU6-47P-201ENST00000383866 107 ntBASIC5.81□□□□□ -1.48
HOXA2O43364 SNORA70E-201ENST00000384492 135 ntBASIC5.81□□□□□ -1.48
HOXA2O43364 AL592148.1-201ENST00000413568 445 ntBASIC5.81□□□□□ -1.48
HOXA2O43364 AL590762.4-201ENST00000425885 253 ntBASIC5.81□□□□□ -1.48
HOXA2O43364 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.81□□□□□ -1.48
HOXA2O43364 AL358472.1-201ENST00000431295 329 ntBASIC5.81□□□□□ -1.48
HOXA2O43364 HIGD1AP2-201ENST00000446367 280 ntBASIC5.81□□□□□ -1.48
HOXA2O43364 AZGP1P2-201ENST00000454506 345 ntBASIC5.81□□□□□ -1.48
HOXA2O43364 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.81□□□□□ -1.48
HOXA2O43364 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.81□□□□□ -1.48
HOXA2O43364 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.81□□□□□ -1.48
HOXA2O43364 AC084851.1-201ENST00000529105 249 ntBASIC5.81□□□□□ -1.48
HOXA2O43364 AP004607.2-201ENST00000533949 322 ntBASIC5.81□□□□□ -1.48
HOXA2O43364 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.81□□□□□ -1.48
HOXA2O43364 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.81□□□□□ -1.48
HOXA2O43364 RN7SL356P-201ENST00000582228 248 ntBASIC5.81□□□□□ -1.48
HOXA2O43364 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.81□□□□□ -1.48
HOXA2O43364 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
HOXA2O43364 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
HOXA2O43364 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
HOXA2O43364 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
HOXA2O43364 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HOXA2O43364 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
HOXA2O43364 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HOXA2O43364 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HOXA2O43364 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HOXA2O43364 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HOXA2O43364 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.81□□□□□ -1.48
HOXA2O43364 SDAD1P2-201ENST00000441308 2028 ntBASIC5.81□□□□□ -1.48
HOXA2O43364 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HOXA2O43364 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
HOXA2O43364 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HOXA2O43364 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HOXA2O43364 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.8□□□□□ -1.48
HOXA2O43364 RNU6-227P-201ENST00000362865 103 ntBASIC5.8□□□□□ -1.48
HOXA2O43364 RNU6-1167P-201ENST00000363227 94 ntBASIC5.8□□□□□ -1.48
HOXA2O43364 Y_RNA.292-201ENST00000364904 97 ntBASIC5.8□□□□□ -1.48
HOXA2O43364 RNU6-81P-201ENST00000365608 104 ntBASIC5.8□□□□□ -1.48
HOXA2O43364 MIR105-1-201ENST00000385222 81 ntBASIC5.8□□□□□ -1.48
HOXA2O43364 RPL37P18-201ENST00000411602 243 ntBASIC5.8□□□□□ -1.48
HOXA2O43364 RPL21P104-201ENST00000464143 478 ntBASIC5.8□□□□□ -1.48
HOXA2O43364 AC022559.1-201ENST00000520905 205 ntBASIC5.8□□□□□ -1.48
HOXA2O43364 AC090617.3-201ENST00000573670 475 ntBASIC5.8□□□□□ -1.48
HOXA2O43364 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.8□□□□□ -1.48
HOXA2O43364 AL139395.1-201ENST00000603662 160 ntBASIC5.8□□□□□ -1.48
HOXA2O43364 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.8□□□□□ -1.48
HOXA2O43364 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.8□□□□□ -1.48
HOXA2O43364 U6.106-201ENST00000636360 105 ntBASIC5.8□□□□□ -1.48
HOXA2O43364 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HOXA2O43364 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.8□□□□□ -1.48
HOXA2O43364 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
HOXA2O43364 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.8□□□□□ -1.48
HOXA2O43364 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.8□□□□□ -1.48
HOXA2O43364 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
HOXA2O43364 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
HOXA2O43364 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HOXA2O43364 AC090740.1-201ENST00000623193 2262 ntBASIC5.79□□□□□ -1.48
HOXA2O43364 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.79□□□□□ -1.48
HOXA2O43364 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HOXA2O43364 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HOXA2O43364 AC022893.2-201ENST00000564832 3296 ntBASIC5.79□□□□□ -1.48
HOXA2O43364 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HOXA2O43364 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXA2O43364 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms