Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AC006518.2-201ENST00000542513 940 ntBASIC1.93□□□□□ -2.1
UBFD1O14562 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.93□□□□□ -2.1
UBFD1O14562 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.93□□□□□ -2.1
UBFD1O14562 AMZ2P1-203ENST00000565833 850 ntBASIC1.93□□□□□ -2.1
UBFD1O14562 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.93□□□□□ -2.1
UBFD1O14562 AC103710.1-201ENST00000610003 901 ntBASIC1.93□□□□□ -2.1
UBFD1O14562 AL353997.5-201ENST00000618886 171 ntBASIC1.93□□□□□ -2.1
UBFD1O14562 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.93□□□□□ -2.1
UBFD1O14562 AL356585.4-201ENST00000623078 1229 ntBASIC1.93□□□□□ -2.1
UBFD1O14562 AL163152.1-201ENST00000642001 374 ntBASIC1.93□□□□□ -2.1
UBFD1O14562 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.93□□□□□ -2.1
UBFD1O14562 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
UBFD1O14562 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.93□□□□□ -2.1
UBFD1O14562 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
UBFD1O14562 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.93□□□□□ -2.1
UBFD1O14562 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.92□□□□□ -2.1
UBFD1O14562 AC010680.1-201ENST00000590024 3590 ntBASIC1.92□□□□□ -2.1
UBFD1O14562 U6.112-201ENST00000384129 70 ntBASIC1.92□□□□□ -2.1
UBFD1O14562 RNU1-52P-201ENST00000384190 164 ntBASIC1.92□□□□□ -2.1
UBFD1O14562 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
UBFD1O14562 SUMO2P12-201ENST00000405924 140 ntBASIC1.92□□□□□ -2.1
UBFD1O14562 U3.40-201ENST00000408706 208 ntBASIC1.92□□□□□ -2.1
UBFD1O14562 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.92□□□□□ -2.1
UBFD1O14562 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.92□□□□□ -2.1
UBFD1O14562 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.92□□□□□ -2.1
UBFD1O14562 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.92□□□□□ -2.1
UBFD1O14562 DEFB130D-201ENST00000426866 237 ntBASIC1.92□□□□□ -2.1
UBFD1O14562 AC009414.1-201ENST00000427200 443 ntBASIC1.92□□□□□ -2.1
UBFD1O14562 AC024082.2-201ENST00000434771 238 ntBASIC1.92□□□□□ -2.1
UBFD1O14562 AC241584.1-201ENST00000438469 1241 ntBASIC1.92□□□□□ -2.1
UBFD1O14562 AC009296.1-201ENST00000443146 155 ntBASIC1.92□□□□□ -2.1
UBFD1O14562 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.92□□□□□ -2.1
UBFD1O14562 RPS15AP34-201ENST00000487776 387 ntBASIC1.92□□□□□ -2.1
UBFD1O14562 AC091860.1-201ENST00000505723 432 ntBASIC1.92□□□□□ -2.1
UBFD1O14562 AC121161.1-201ENST00000510606 652 ntBASIC1.92□□□□□ -2.1
UBFD1O14562 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.92□□□□□ -2.1
UBFD1O14562 RNA5SP458-201ENST00000516188 119 ntBASIC1.92□□□□□ -2.1
UBFD1O14562 HMGB1P1-201ENST00000522557 636 ntBASIC1.92□□□□□ -2.1
UBFD1O14562 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.92□□□□□ -2.1
UBFD1O14562 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.92□□□□□ -2.1
UBFD1O14562 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.92□□□□□ -2.1
UBFD1O14562 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
UBFD1O14562 AC009127.3-201ENST00000570531 403 ntBASIC1.92□□□□□ -2.1
UBFD1O14562 MIR3609-201ENST00000582661 80 ntBASIC1.92□□□□□ -2.1
UBFD1O14562 AC068313.1-201ENST00000604028 1008 ntBASIC1.92□□□□□ -2.1
UBFD1O14562 APOOP1-201ENST00000604695 592 ntBASIC1.92□□□□□ -2.1
UBFD1O14562 AC026741.1-201ENST00000605892 482 ntBASIC1.92□□□□□ -2.1
UBFD1O14562 AC012467.1-201ENST00000607740 256 ntBASIC1.92□□□□□ -2.1
UBFD1O14562 VN1R74P-201ENST00000613259 503 ntBASIC1.92□□□□□ -2.1
UBFD1O14562 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
UBFD1O14562 DUXAP9-208ENST00000622815 614 ntBASIC1.92□□□□□ -2.1
UBFD1O14562 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.92□□□□□ -2.1
UBFD1O14562 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.92□□□□□ -2.1
UBFD1O14562 AC241585.2-209ENST00000638217 143 ntBASIC1.92□□□□□ -2.1
UBFD1O14562 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.92□□□□□ -2.1
UBFD1O14562 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.91□□□□□ -2.1
UBFD1O14562 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.91□□□□□ -2.1
UBFD1O14562 RNU4-72P-201ENST00000410754 173 ntBASIC1.91□□□□□ -2.1
UBFD1O14562 MTCYBP32-201ENST00000427945 1084 ntBASIC1.91□□□□□ -2.1
UBFD1O14562 FO393414.1-201ENST00000428697 1184 ntBASIC1.91□□□□□ -2.1
UBFD1O14562 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.91□□□□□ -2.1
UBFD1O14562 EZH2P1-201ENST00000431167 291 ntBASIC1.91□□□□□ -2.1
UBFD1O14562 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC1.91□□□□□ -2.1
UBFD1O14562 MTCO1P48-201ENST00000448024 1096 ntBASIC1.91□□□□□ -2.1
UBFD1O14562 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.91□□□□□ -2.1
UBFD1O14562 RFC5P1-201ENST00000454419 874 ntBASIC1.91□□□□□ -2.1
UBFD1O14562 AC068587.2-201ENST00000478386 781 ntBASIC1.91□□□□□ -2.1
UBFD1O14562 OR4G11P-201ENST00000492842 939 ntBASIC1.91□□□□□ -2.1
UBFD1O14562 AC008427.1-201ENST00000503102 655 ntBASIC1.91□□□□□ -2.1
UBFD1O14562 AC147055.4-201ENST00000504399 745 ntBASIC1.91□□□□□ -2.1
UBFD1O14562 RNU6-928P-201ENST00000516876 104 ntBASIC1.91□□□□□ -2.1
UBFD1O14562 RNU6-798P-201ENST00000516912 103 ntBASIC1.91□□□□□ -2.1
UBFD1O14562 RNA5SP364-201ENST00000516938 78 ntBASIC1.91□□□□□ -2.1
UBFD1O14562 HSPE1P18-201ENST00000517602 280 ntBASIC1.91□□□□□ -2.1
UBFD1O14562 NDUFS5P6-201ENST00000529136 295 ntBASIC1.91□□□□□ -2.1
UBFD1O14562 AC008127.2-201ENST00000549925 1075 ntBASIC1.91□□□□□ -2.1
UBFD1O14562 SETP7-201ENST00000552169 453 ntBASIC1.91□□□□□ -2.1
UBFD1O14562 AC090888.1-201ENST00000561335 1141 ntBASIC1.91□□□□□ -2.1
UBFD1O14562 AC079148.1-201ENST00000565944 819 ntBASIC1.91□□□□□ -2.1
UBFD1O14562 KC877982.1-201ENST00000602313 470 ntBASIC1.91□□□□□ -2.1
UBFD1O14562 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.91□□□□□ -2.1
UBFD1O14562 AL136363.1-201ENST00000605349 337 ntBASIC1.91□□□□□ -2.1
UBFD1O14562 AP005137.2-201ENST00000609238 400 ntBASIC1.91□□□□□ -2.1
UBFD1O14562 AP000254.1-201ENST00000609934 520 ntBASIC1.91□□□□□ -2.1
UBFD1O14562 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.91□□□□□ -2.1
UBFD1O14562 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC1.91□□□□□ -2.1
UBFD1O14562 AC245884.12-201ENST00000615364 59 ntBASIC1.91□□□□□ -2.1
UBFD1O14562 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.91□□□□□ -2.1
UBFD1O14562 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.91□□□□□ -2.1
UBFD1O14562 AL109809.4-201ENST00000603520 2185 ntBASIC1.91□□□□□ -2.1
UBFD1O14562 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.9□□□□□ -2.1
UBFD1O14562 RNU6-1197P-201ENST00000391183 107 ntBASIC1.9□□□□□ -2.11
UBFD1O14562 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.9□□□□□ -2.11
UBFD1O14562 AP002784.2-201ENST00000397300 549 ntBASIC1.9□□□□□ -2.11
UBFD1O14562 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.9□□□□□ -2.11
UBFD1O14562 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.9□□□□□ -2.11
UBFD1O14562 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.9□□□□□ -2.11
UBFD1O14562 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.9□□□□□ -2.11
UBFD1O14562 AL445646.1-201ENST00000431784 216 ntBASIC1.9□□□□□ -2.11
UBFD1O14562 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 187.8 ms