Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AMZ2P1-203ENST00000565833 850 ntBASIC2.12□□□□□ -2.07
UPK1AO00322 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.12□□□□□ -2.07
UPK1AO00322 MTND4LP25-201ENST00000570218 163 ntBASIC2.12□□□□□ -2.07
UPK1AO00322 AP002802.2-201ENST00000605877 235 ntBASIC2.12□□□□□ -2.07
UPK1AO00322 MIR6130-201ENST00000619419 109 ntBASIC2.12□□□□□ -2.07
UPK1AO00322 UCA1.1-201ENST00000620952 75 ntBASIC2.12□□□□□ -2.07
UPK1AO00322 AL159972.1-201ENST00000625150 448 ntBASIC2.12□□□□□ -2.07
UPK1AO00322 SCARNA15.3-201ENST00000626315 122 ntBASIC2.12□□□□□ -2.07
UPK1AO00322 SCARNA4.1-201ENST00000628597 123 ntBASIC2.12□□□□□ -2.07
UPK1AO00322 AP005901.5-201ENST00000545779 1796 ntBASIC2.12□□□□□ -2.07
UPK1AO00322 OR4G2P-202ENST00000641004 1759 ntBASIC2.12□□□□□ -2.07
UPK1AO00322 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
UPK1AO00322 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
UPK1AO00322 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
UPK1AO00322 MIR514A1-201ENST00000385133 98 ntBASIC2.11□□□□□ -2.07
UPK1AO00322 RNA5SP338-201ENST00000410495 85 ntBASIC2.11□□□□□ -2.07
UPK1AO00322 AL592310.1-201ENST00000414330 671 ntBASIC2.11□□□□□ -2.07
UPK1AO00322 AC007435.1-201ENST00000421086 415 ntBASIC2.11□□□□□ -2.07
UPK1AO00322 GTF2IP7-202ENST00000436677 309 ntBASIC2.11□□□□□ -2.07
UPK1AO00322 MTND4P6-201ENST00000438297 472 ntBASIC2.11□□□□□ -2.07
UPK1AO00322 AC092155.2-201ENST00000454675 477 ntBASIC2.11□□□□□ -2.07
UPK1AO00322 snoU13.8-201ENST00000458890 104 ntBASIC2.11□□□□□ -2.07
UPK1AO00322 AC108734.3-201ENST00000481241 1165 ntBASIC2.11□□□□□ -2.07
UPK1AO00322 AC069528.1-202ENST00000482888 637 ntBASIC2.11□□□□□ -2.07
UPK1AO00322 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.11□□□□□ -2.07
UPK1AO00322 HMGB3P3-201ENST00000510526 400 ntBASIC2.11□□□□□ -2.07
UPK1AO00322 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
UPK1AO00322 RNA5SP281-201ENST00000516504 135 ntBASIC2.11□□□□□ -2.07
UPK1AO00322 RNU6-1282P-201ENST00000516735 96 ntBASIC2.11□□□□□ -2.07
UPK1AO00322 RNU6-528P-201ENST00000516926 100 ntBASIC2.11□□□□□ -2.07
UPK1AO00322 RNU6-1028P-201ENST00000517164 93 ntBASIC2.11□□□□□ -2.07
UPK1AO00322 MTCYBP20-201ENST00000524239 1129 ntBASIC2.11□□□□□ -2.07
UPK1AO00322 AC068135.2-201ENST00000569293 1028 ntBASIC2.11□□□□□ -2.07
UPK1AO00322 MIR3912-201ENST00000577566 105 ntBASIC2.11□□□□□ -2.07
UPK1AO00322 AC013553.2-201ENST00000604244 589 ntBASIC2.11□□□□□ -2.07
UPK1AO00322 AL390208.1-201ENST00000605885 644 ntBASIC2.11□□□□□ -2.07
UPK1AO00322 AL158211.4-201ENST00000606988 584 ntBASIC2.11□□□□□ -2.07
UPK1AO00322 AC124016.2-201ENST00000610058 665 ntBASIC2.11□□□□□ -2.07
UPK1AO00322 AC090132.2-201ENST00000615881 347 ntBASIC2.11□□□□□ -2.07
UPK1AO00322 AL512427.1-201ENST00000618593 349 ntBASIC2.11□□□□□ -2.07
UPK1AO00322 AC253576.2-201ENST00000618815 580 ntBASIC2.11□□□□□ -2.07
UPK1AO00322 AP003485.1-201ENST00000625093 753 ntBASIC2.11□□□□□ -2.07
UPK1AO00322 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
UPK1AO00322 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
UPK1AO00322 AC006020.1-201ENST00000420179 1854 ntBASIC2.1□□□□□ -2.07
UPK1AO00322 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
UPK1AO00322 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
UPK1AO00322 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
UPK1AO00322 MIR627-201ENST00000384979 97 ntBASIC2.1□□□□□ -2.07
UPK1AO00322 MIR634-201ENST00000385208 97 ntBASIC2.1□□□□□ -2.07
UPK1AO00322 UBE2V1P2-201ENST00000397758 440 ntBASIC2.1□□□□□ -2.07
UPK1AO00322 MTCO1P56-201ENST00000401674 224 ntBASIC2.1□□□□□ -2.07
UPK1AO00322 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.1□□□□□ -2.07
UPK1AO00322 AL161449.1-201ENST00000414531 1199 ntBASIC2.1□□□□□ -2.07
UPK1AO00322 Z85995.1-201ENST00000415547 335 ntBASIC2.1□□□□□ -2.07
UPK1AO00322 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.1□□□□□ -2.07
UPK1AO00322 AL139421.1-201ENST00000423010 169 ntBASIC2.1□□□□□ -2.07
UPK1AO00322 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.1□□□□□ -2.07
UPK1AO00322 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.1□□□□□ -2.07
UPK1AO00322 AC087588.1-201ENST00000462203 316 ntBASIC2.1□□□□□ -2.07
UPK1AO00322 FAM172BP-201ENST00000487497 1089 ntBASIC2.1□□□□□ -2.07
UPK1AO00322 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.1□□□□□ -2.07
UPK1AO00322 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.1□□□□□ -2.07
UPK1AO00322 AC098799.1-201ENST00000504752 800 ntBASIC2.1□□□□□ -2.07
UPK1AO00322 AC016550.1-201ENST00000505348 785 ntBASIC2.1□□□□□ -2.07
UPK1AO00322 MTCYBP16-201ENST00000509187 1129 ntBASIC2.1□□□□□ -2.07
UPK1AO00322 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.1□□□□□ -2.07
UPK1AO00322 RNU6-1225P-201ENST00000516336 65 ntBASIC2.1□□□□□ -2.07
UPK1AO00322 SCARNA15.2-201ENST00000516409 127 ntBASIC2.1□□□□□ -2.07
UPK1AO00322 SNORA31.22-201ENST00000517204 135 ntBASIC2.1□□□□□ -2.07
UPK1AO00322 LRRC6P1-201ENST00000532188 885 ntBASIC2.1□□□□□ -2.07
UPK1AO00322 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
UPK1AO00322 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
UPK1AO00322 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.1□□□□□ -2.07
UPK1AO00322 HIGD1AP17-201ENST00000554576 276 ntBASIC2.1□□□□□ -2.07
UPK1AO00322 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.1□□□□□ -2.07
UPK1AO00322 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.1□□□□□ -2.07
UPK1AO00322 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.1□□□□□ -2.07
UPK1AO00322 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.1□□□□□ -2.07
UPK1AO00322 AC126365.2-201ENST00000580630 379 ntBASIC2.1□□□□□ -2.07
UPK1AO00322 AC007938.3-201ENST00000604965 623 ntBASIC2.1□□□□□ -2.07
UPK1AO00322 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.1□□□□□ -2.07
UPK1AO00322 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.1□□□□□ -2.07
UPK1AO00322 AL049641.1-201ENST00000441055 1948 ntBASIC2.1□□□□□ -2.07
UPK1AO00322 SDAD1P2-201ENST00000441308 2028 ntBASIC2.1□□□□□ -2.07
UPK1AO00322 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.09□□□□□ -2.07
UPK1AO00322 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.07
UPK1AO00322 RNU6-270P-201ENST00000364131 105 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 XGY1-201ENST00000381172 446 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 RNU6-224P-201ENST00000384055 107 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.09□□□□□ -2.07
UPK1AO00322 MTND4P3-201ENST00000417829 541 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 AC009414.1-201ENST00000427200 443 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.09□□□□□ -2.07
UPK1AO00322 AC008850.1-201ENST00000427546 362 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 MTND2P20-201ENST00000440805 661 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 AL591719.1-201ENST00000444669 744 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 DDX3P2-201ENST00000446138 111 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 HIGD1AP2-201ENST00000446367 280 ntBASIC2.09□□□□□ -2.07
UPK1AO00322 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms