Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL133393.1-201ENST00000603277 287 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 AC008277.2-201ENST00000605196 797 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 AL360219.1-201ENST00000610230 366 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 AL355472.4-201ENST00000610233 626 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 MIR7844-201ENST00000616161 122 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 AC084757.4-201ENST00000616350 526 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 AC012314.7-201ENST00000619693 93 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 AL049641.1-201ENST00000441055 1948 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CCDC188H7C350 AC233263.6-201ENST00000631132 1963 ntBASIC3.16□□□□□ -1.9
CCDC188H7C350 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.15□□□□□ -1.9
CCDC188H7C350 Y_RNA.46-201ENST00000362695 102 ntBASIC3.15□□□□□ -1.91
CCDC188H7C350 SNORA14A-201ENST00000364773 135 ntBASIC3.15□□□□□ -1.91
CCDC188H7C350 CD24P4-201ENST00000382840 243 ntBASIC3.15□□□□□ -1.91
CCDC188H7C350 RPS20P2-201ENST00000402520 389 ntBASIC3.15□□□□□ -1.91
CCDC188H7C350 Z85995.1-201ENST00000415547 335 ntBASIC3.15□□□□□ -1.91
CCDC188H7C350 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC188H7C350 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC188H7C350 AL451054.2-201ENST00000420896 202 ntBASIC3.15□□□□□ -1.91
CCDC188H7C350 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC188H7C350 AC006366.1-201ENST00000422002 759 ntBASIC3.15□□□□□ -1.91
CCDC188H7C350 AC091390.3-201ENST00000426478 338 ntBASIC3.15□□□□□ -1.91
CCDC188H7C350 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.15□□□□□ -1.91
CCDC188H7C350 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC188H7C350 Z82210.1-201ENST00000440037 231 ntBASIC3.15□□□□□ -1.91
CCDC188H7C350 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.15□□□□□ -1.91
CCDC188H7C350 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC188H7C350 LARP1BP2-201ENST00000486594 519 ntBASIC3.15□□□□□ -1.91
CCDC188H7C350 AC112204.1-201ENST00000502591 103 ntBASIC3.15□□□□□ -1.91
CCDC188H7C350 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC188H7C350 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC188H7C350 AC005178.1-201ENST00000508392 440 ntBASIC3.15□□□□□ -1.91
CCDC188H7C350 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC188H7C350 MTND5P13-201ENST00000513046 1079 ntBASIC3.15□□□□□ -1.91
CCDC188H7C350 AC114797.1-201ENST00000514003 728 ntBASIC3.15□□□□□ -1.91
CCDC188H7C350 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC188H7C350 RNU6-64P-201ENST00000517119 105 ntBASIC3.15□□□□□ -1.91
CCDC188H7C350 AC026407.1-201ENST00000518369 204 ntBASIC3.15□□□□□ -1.91
CCDC188H7C350 AC026403.1-201ENST00000518938 295 ntBASIC3.15□□□□□ -1.91
CCDC188H7C350 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC188H7C350 AC007115.1-201ENST00000546853 234 ntBASIC3.15□□□□□ -1.91
CCDC188H7C350 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.15□□□□□ -1.91
CCDC188H7C350 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.15□□□□□ -1.91
CCDC188H7C350 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC188H7C350 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC188H7C350 AC006504.3-201ENST00000586818 523 ntBASIC3.15□□□□□ -1.91
CCDC188H7C350 AC069200.1-201ENST00000609511 323 ntBASIC3.15□□□□□ -1.91
CCDC188H7C350 AL161629.2-201ENST00000615347 275 ntBASIC3.15□□□□□ -1.91
CCDC188H7C350 SNHG22-203ENST00000617833 660 ntBASIC3.15□□□□□ -1.91
CCDC188H7C350 AC120349.3-201ENST00000624377 529 ntBASIC3.15□□□□□ -1.91
CCDC188H7C350 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC188H7C350 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC188H7C350 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC188H7C350 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC188H7C350 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC188H7C350 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC188H7C350 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC188H7C350 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC188H7C350 RNU6-1027P-201ENST00000383998 107 ntBASIC3.14□□□□□ -1.91
CCDC188H7C350 MIR181B1-201ENST00000385240 110 ntBASIC3.14□□□□□ -1.91
CCDC188H7C350 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CCDC188H7C350 SAR1AP2-201ENST00000392696 594 ntBASIC3.14□□□□□ -1.91
CCDC188H7C350 RNU4-72P-201ENST00000410754 173 ntBASIC3.14□□□□□ -1.91
CCDC188H7C350 AC078974.1-201ENST00000411597 223 ntBASIC3.14□□□□□ -1.91
CCDC188H7C350 RPS29P4-201ENST00000414733 161 ntBASIC3.14□□□□□ -1.91
CCDC188H7C350 RPS6P15-201ENST00000431996 751 ntBASIC3.14□□□□□ -1.91
CCDC188H7C350 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC188H7C350 RPS29P6-201ENST00000438196 145 ntBASIC3.14□□□□□ -1.91
CCDC188H7C350 AL512286.1-201ENST00000439244 400 ntBASIC3.14□□□□□ -1.91
CCDC188H7C350 AC010099.1-201ENST00000455434 375 ntBASIC3.14□□□□□ -1.91
CCDC188H7C350 RPL23AP11-201ENST00000475260 469 ntBASIC3.14□□□□□ -1.91
CCDC188H7C350 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC188H7C350 MTND1P22-201ENST00000510572 951 ntBASIC3.14□□□□□ -1.91
CCDC188H7C350 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC188H7C350 NRON-201ENST00000517270 370 ntBASIC3.14□□□□□ -1.91
CCDC188H7C350 ATP5F1P5-201ENST00000526403 760 ntBASIC3.14□□□□□ -1.91
CCDC188H7C350 AC007458.1-201ENST00000542812 373 ntBASIC3.14□□□□□ -1.91
CCDC188H7C350 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.14□□□□□ -1.91
CCDC188H7C350 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC188H7C350 HMGB1P14-201ENST00000557424 591 ntBASIC3.14□□□□□ -1.91
CCDC188H7C350 TRAV28-201ENST00000557548 323 ntBASIC3.14□□□□□ -1.91
CCDC188H7C350 AC091489.2-201ENST00000566263 604 ntBASIC3.14□□□□□ -1.91
CCDC188H7C350 MIR3922-201ENST00000585192 84 ntBASIC3.14□□□□□ -1.91
CCDC188H7C350 GLUD1P4-201ENST00000590914 418 ntBASIC3.14□□□□□ -1.91
CCDC188H7C350 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC188H7C350 AC105129.3-201ENST00000605455 485 ntBASIC3.14□□□□□ -1.91
CCDC188H7C350 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC188H7C350 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.14□□□□□ -1.91
CCDC188H7C350 AC099506.2-201ENST00000623074 221 ntBASIC3.14□□□□□ -1.91
CCDC188H7C350 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC188H7C350 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC188H7C350 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC188H7C350 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CCDC188H7C350 AC110774.1-201ENST00000623567 2018 ntBASIC3.14□□□□□ -1.91
CCDC188H7C350 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC188H7C350 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC188H7C350 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
CCDC188H7C350 RNU6-553P-201ENST00000364047 96 ntBASIC3.13□□□□□ -1.91
CCDC188H7C350 RNU1-33P-201ENST00000364249 162 ntBASIC3.13□□□□□ -1.91
CCDC188H7C350 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms