Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RNF223E7ERA6 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF223E7ERA6 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF223E7ERA6 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF223E7ERA6 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF223E7ERA6 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
RNF223E7ERA6 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
RNF223E7ERA6 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF223E7ERA6 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
RNF223E7ERA6 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.07□□□□□ -1.6
RNF223E7ERA6 AC079753.1-201ENST00000623243 3868 ntBASIC5.07□□□□□ -1.6
RNF223E7ERA6 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF223E7ERA6 RN7SKP160-201ENST00000363804 340 ntBASIC5.07□□□□□ -1.6
RNF223E7ERA6 RNA5SP31-201ENST00000411144 127 ntBASIC5.07□□□□□ -1.6
RNF223E7ERA6 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.07□□□□□ -1.6
RNF223E7ERA6 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.07□□□□□ -1.6
RNF223E7ERA6 AL132838.2-201ENST00000492041 314 ntBASIC5.07□□□□□ -1.6
RNF223E7ERA6 SNORA58-201ENST00000505219 137 ntBASIC5.07□□□□□ -1.6
RNF223E7ERA6 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.07□□□□□ -1.6
RNF223E7ERA6 AP004607.1-201ENST00000524456 203 ntBASIC5.07□□□□□ -1.6
RNF223E7ERA6 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.07□□□□□ -1.6
RNF223E7ERA6 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.07□□□□□ -1.6
RNF223E7ERA6 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.07□□□□□ -1.6
RNF223E7ERA6 AL691477.1-201ENST00000624398 162 ntBASIC5.07□□□□□ -1.6
RNF223E7ERA6 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF223E7ERA6 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC5.07□□□□□ -1.6
RNF223E7ERA6 AC138915.1-201ENST00000565427 1685 ntBASIC5.07□□□□□ -1.6
RNF223E7ERA6 OR13C1P-202ENST00000641378 2919 ntBASIC5.07□□□□□ -1.6
RNF223E7ERA6 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
RNF223E7ERA6 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
RNF223E7ERA6 AL359693.1-201ENST00000614959 2407 ntBASIC5.07□□□□□ -1.6
RNF223E7ERA6 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
RNF223E7ERA6 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF223E7ERA6 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF223E7ERA6 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF223E7ERA6 AC022905.1-201ENST00000503430 3048 ntBASIC5.07□□□□□ -1.6
RNF223E7ERA6 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RNF223E7ERA6 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF223E7ERA6 AC092692.1-201ENST00000623625 2595 ntBASIC5.07□□□□□ -1.6
RNF223E7ERA6 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF223E7ERA6 AC110716.2-201ENST00000563865 3945 ntBASIC5.06□□□□□ -1.6
RNF223E7ERA6 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RNF223E7ERA6 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RNF223E7ERA6 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF223E7ERA6 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RNF223E7ERA6 AC022164.1-201ENST00000568767 2673 ntBASIC5.06□□□□□ -1.6
RNF223E7ERA6 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF223E7ERA6 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF223E7ERA6 RNA5SP375-201ENST00000362975 119 ntBASIC5.06□□□□□ -1.6
RNF223E7ERA6 SNORA74A-201ENST00000364089 198 ntBASIC5.06□□□□□ -1.6
RNF223E7ERA6 RNU6-49P-201ENST00000384256 107 ntBASIC5.06□□□□□ -1.6
RNF223E7ERA6 RNU6-837P-201ENST00000391056 108 ntBASIC5.06□□□□□ -1.6
RNF223E7ERA6 RPL21P17-201ENST00000397467 475 ntBASIC5.06□□□□□ -1.6
RNF223E7ERA6 AL512604.1-201ENST00000404812 257 ntBASIC5.06□□□□□ -1.6
RNF223E7ERA6 OR2AT2P-201ENST00000413438 905 ntBASIC5.06□□□□□ -1.6
RNF223E7ERA6 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF223E7ERA6 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF223E7ERA6 AC006028.1-201ENST00000438379 402 ntBASIC5.06□□□□□ -1.6
RNF223E7ERA6 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.06□□□□□ -1.6
RNF223E7ERA6 RPL10P17-201ENST00000453852 316 ntBASIC5.06□□□□□ -1.6
RNF223E7ERA6 Y_RNA.649-201ENST00000459077 103 ntBASIC5.06□□□□□ -1.6
RNF223E7ERA6 RN7SL515P-201ENST00000463999 297 ntBASIC5.06□□□□□ -1.6
RNF223E7ERA6 AC091179.3-201ENST00000474761 144 ntBASIC5.06□□□□□ -1.6
RNF223E7ERA6 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.06□□□□□ -1.6
RNF223E7ERA6 UBE2CP3-201ENST00000502715 450 ntBASIC5.06□□□□□ -1.6
RNF223E7ERA6 AC016632.1-201ENST00000503994 196 ntBASIC5.06□□□□□ -1.6
RNF223E7ERA6 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.06□□□□□ -1.6
RNF223E7ERA6 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.06□□□□□ -1.6
RNF223E7ERA6 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF223E7ERA6 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.06□□□□□ -1.6
RNF223E7ERA6 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC5.06□□□□□ -1.6
RNF223E7ERA6 AL136131.3-201ENST00000607600 188 ntBASIC5.06□□□□□ -1.6
RNF223E7ERA6 U73479.1-201ENST00000618062 168 ntBASIC5.06□□□□□ -1.6
RNF223E7ERA6 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RNF223E7ERA6 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF223E7ERA6 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF223E7ERA6 Z82209.1-201ENST00000422141 2135 ntBASIC5.06□□□□□ -1.6
RNF223E7ERA6 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF223E7ERA6 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
RNF223E7ERA6 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
RNF223E7ERA6 AC011504.1-201ENST00000623331 4103 ntBASIC5.06□□□□□ -1.6
RNF223E7ERA6 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF223E7ERA6 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
RNF223E7ERA6 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.06□□□□□ -1.6
RNF223E7ERA6 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RNF223E7ERA6 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF223E7ERA6 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.05□□□□□ -1.6
RNF223E7ERA6 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.05□□□□□ -1.6
RNF223E7ERA6 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RNF223E7ERA6 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF223E7ERA6 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RNF223E7ERA6 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF223E7ERA6 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.05□□□□□ -1.6
RNF223E7ERA6 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF223E7ERA6 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.05□□□□□ -1.6
RNF223E7ERA6 RNA5SP350-201ENST00000363298 111 ntBASIC5.05□□□□□ -1.6
RNF223E7ERA6 Y_RNA.120-201ENST00000363304 110 ntBASIC5.05□□□□□ -1.6
RNF223E7ERA6 RNU6-1205P-201ENST00000363625 106 ntBASIC5.05□□□□□ -1.6
RNF223E7ERA6 RNU6-356P-201ENST00000384140 107 ntBASIC5.05□□□□□ -1.6
RNF223E7ERA6 SNORA66-201ENST00000384792 133 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms