Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 DEFB108F-201ENST00000344638 222 ntBASIC5.58□□□□□ -1.52
CFAP99D6REC4 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CFAP99D6REC4 RNA5SP46-201ENST00000362370 120 ntBASIC5.58□□□□□ -1.52
CFAP99D6REC4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CFAP99D6REC4 BTF3L4P2-201ENST00000392798 346 ntBASIC5.58□□□□□ -1.52
CFAP99D6REC4 TMSB10P2-201ENST00000416049 131 ntBASIC5.58□□□□□ -1.52
CFAP99D6REC4 AL358453.1-201ENST00000422522 250 ntBASIC5.58□□□□□ -1.52
CFAP99D6REC4 MTND6P12-201ENST00000428247 522 ntBASIC5.58□□□□□ -1.52
CFAP99D6REC4 RPS29P14-201ENST00000431518 171 ntBASIC5.58□□□□□ -1.52
CFAP99D6REC4 RPL12P11-201ENST00000439970 501 ntBASIC5.58□□□□□ -1.52
CFAP99D6REC4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC5.58□□□□□ -1.52
CFAP99D6REC4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC5.58□□□□□ -1.52
CFAP99D6REC4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.58□□□□□ -1.52
CFAP99D6REC4 SNORD125-201ENST00000459538 96 ntBASIC5.58□□□□□ -1.52
CFAP99D6REC4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.58□□□□□ -1.52
CFAP99D6REC4 RPS26P21-201ENST00000475397 348 ntBASIC5.58□□□□□ -1.52
CFAP99D6REC4 AL160314.1-201ENST00000490836 438 ntBASIC5.58□□□□□ -1.52
CFAP99D6REC4 AC074198.2-201ENST00000508153 258 ntBASIC5.58□□□□□ -1.52
CFAP99D6REC4 AC137627.1-201ENST00000545761 289 ntBASIC5.58□□□□□ -1.52
CFAP99D6REC4 AC010547.6-201ENST00000571789 193 ntBASIC5.58□□□□□ -1.52
CFAP99D6REC4 MIR4310-201ENST00000582950 57 ntBASIC5.58□□□□□ -1.52
CFAP99D6REC4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.58□□□□□ -1.52
CFAP99D6REC4 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.58□□□□□ -1.52
CFAP99D6REC4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.58□□□□□ -1.52
CFAP99D6REC4 AC127024.6-201ENST00000621598 424 ntBASIC5.58□□□□□ -1.52
CFAP99D6REC4 U6.106-201ENST00000636360 105 ntBASIC5.58□□□□□ -1.52
CFAP99D6REC4 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CFAP99D6REC4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CFAP99D6REC4 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CFAP99D6REC4 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CFAP99D6REC4 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CFAP99D6REC4 AC018809.2-201ENST00000602436 3823 ntBASIC5.58□□□□□ -1.52
CFAP99D6REC4 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CFAP99D6REC4 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CFAP99D6REC4 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CFAP99D6REC4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
CFAP99D6REC4 OR4F13P-202ENST00000560066 2054 ntBASIC5.57□□□□□ -1.52
CFAP99D6REC4 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CFAP99D6REC4 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CFAP99D6REC4 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CFAP99D6REC4 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CFAP99D6REC4 RNU6-428P-201ENST00000362942 107 ntBASIC5.57□□□□□ -1.52
CFAP99D6REC4 U3.7-201ENST00000363668 216 ntBASIC5.57□□□□□ -1.52
CFAP99D6REC4 RN7SKP15-201ENST00000364742 309 ntBASIC5.57□□□□□ -1.52
CFAP99D6REC4 Y_RNA.292-201ENST00000364904 97 ntBASIC5.57□□□□□ -1.52
CFAP99D6REC4 AC124916.1-201ENST00000444020 547 ntBASIC5.57□□□□□ -1.52
CFAP99D6REC4 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.57□□□□□ -1.52
CFAP99D6REC4 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.57□□□□□ -1.52
CFAP99D6REC4 AC144530.1-201ENST00000452862 555 ntBASIC5.57□□□□□ -1.52
CFAP99D6REC4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.57□□□□□ -1.52
CFAP99D6REC4 HMGB1P14-201ENST00000557424 591 ntBASIC5.57□□□□□ -1.52
CFAP99D6REC4 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.57□□□□□ -1.52
CFAP99D6REC4 AC093799.2-201ENST00000610062 578 ntBASIC5.57□□□□□ -1.52
CFAP99D6REC4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.57□□□□□ -1.52
CFAP99D6REC4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.57□□□□□ -1.52
CFAP99D6REC4 AC006484.1-201ENST00000435086 1884 ntBASIC5.57□□□□□ -1.52
CFAP99D6REC4 AC090971.4-201ENST00000560291 1800 ntBASIC5.57□□□□□ -1.52
CFAP99D6REC4 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CFAP99D6REC4 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CFAP99D6REC4 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CFAP99D6REC4 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
CFAP99D6REC4 LINC01963-201ENST00000562038 3148 ntBASIC5.57□□□□□ -1.52
CFAP99D6REC4 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CFAP99D6REC4 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CFAP99D6REC4 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CFAP99D6REC4 ZNF826P-207ENST00000622273 1910 ntBASIC5.56□□□□□ -1.52
CFAP99D6REC4 SRRM1P3-201ENST00000426911 2678 ntBASIC5.56□□□□□ -1.52
CFAP99D6REC4 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CFAP99D6REC4 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.56□□□□□ -1.52
CFAP99D6REC4 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.56□□□□□ -1.52
CFAP99D6REC4 LINC01109-201ENST00000603837 3081 ntBASIC5.56□□□□□ -1.52
CFAP99D6REC4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CFAP99D6REC4 Y_RNA.245-201ENST00000364493 95 ntBASIC5.56□□□□□ -1.52
CFAP99D6REC4 Y_RNA.304-201ENST00000365011 112 ntBASIC5.56□□□□□ -1.52
CFAP99D6REC4 RNU5E-7P-201ENST00000365290 117 ntBASIC5.56□□□□□ -1.52
CFAP99D6REC4 RNA5SP131-201ENST00000365452 119 ntBASIC5.56□□□□□ -1.52
CFAP99D6REC4 RNA5SP122-201ENST00000384457 108 ntBASIC5.56□□□□□ -1.52
CFAP99D6REC4 AL009179.1-201ENST00000406085 265 ntBASIC5.56□□□□□ -1.52
CFAP99D6REC4 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.56□□□□□ -1.52
CFAP99D6REC4 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.56□□□□□ -1.52
CFAP99D6REC4 RPL12P18-201ENST00000437175 325 ntBASIC5.56□□□□□ -1.52
CFAP99D6REC4 AC064862.4-201ENST00000442180 334 ntBASIC5.56□□□□□ -1.52
CFAP99D6REC4 RPL36AP39-201ENST00000445859 318 ntBASIC5.56□□□□□ -1.52
CFAP99D6REC4 RPL23AP24-201ENST00000458203 385 ntBASIC5.56□□□□□ -1.52
CFAP99D6REC4 TOMM22P6-201ENST00000465035 409 ntBASIC5.56□□□□□ -1.52
CFAP99D6REC4 AC091021.1-201ENST00000468051 388 ntBASIC5.56□□□□□ -1.52
CFAP99D6REC4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.56□□□□□ -1.52
CFAP99D6REC4 RNU7-200P-201ENST00000516105 62 ntBASIC5.56□□□□□ -1.52
CFAP99D6REC4 SCARNA15.2-201ENST00000516409 127 ntBASIC5.56□□□□□ -1.52
CFAP99D6REC4 RPL21P7-201ENST00000557463 483 ntBASIC5.56□□□□□ -1.52
CFAP99D6REC4 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.56□□□□□ -1.52
CFAP99D6REC4 AC011476.5-201ENST00000615594 130 ntBASIC5.56□□□□□ -1.52
CFAP99D6REC4 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.56□□□□□ -1.52
CFAP99D6REC4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CFAP99D6REC4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CFAP99D6REC4 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CFAP99D6REC4 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CFAP99D6REC4 AL731532.2-201ENST00000623542 1953 ntBASIC5.56□□□□□ -1.52
CFAP99D6REC4 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CFAP99D6REC4 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms