Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 MIR4672-201ENST00000583126 81 ntBASIC0.79□□□□□ -2.28
LINC01549A6NIU2 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.79□□□□□ -2.28
LINC01549A6NIU2 AP001542.2-201ENST00000593141 364 ntBASIC0.79□□□□□ -2.28
LINC01549A6NIU2 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC0.79□□□□□ -2.28
LINC01549A6NIU2 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.79□□□□□ -2.28
LINC01549A6NIU2 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC0.79□□□□□ -2.28
LINC01549A6NIU2 MIR7515-201ENST00000637837 67 ntBASIC0.79□□□□□ -2.28
LINC01549A6NIU2 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
LINC01549A6NIU2 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
LINC01549A6NIU2 AC123912.3-201ENST00000600907 1367 ntBASIC0.79□□□□□ -2.28
LINC01549A6NIU2 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
LINC01549A6NIU2 PAPPA-AS1-201ENST00000445861 2450 ntBASIC0.78□□□□□ -2.28
LINC01549A6NIU2 RNA5SP190-201ENST00000365222 118 ntBASIC0.78□□□□□ -2.28
LINC01549A6NIU2 RNU6-198P-201ENST00000384258 104 ntBASIC0.78□□□□□ -2.28
LINC01549A6NIU2 Y_RNA.510-201ENST00000384511 114 ntBASIC0.78□□□□□ -2.28
LINC01549A6NIU2 MIR767-201ENST00000390228 109 ntBASIC0.78□□□□□ -2.28
LINC01549A6NIU2 TXNP7-201ENST00000406296 293 ntBASIC0.78□□□□□ -2.28
LINC01549A6NIU2 CYCSP48-201ENST00000417124 323 ntBASIC0.78□□□□□ -2.28
LINC01549A6NIU2 AC006946.1-201ENST00000429106 328 ntBASIC0.78□□□□□ -2.28
LINC01549A6NIU2 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC0.78□□□□□ -2.28
LINC01549A6NIU2 AL022238.1-201ENST00000442557 355 ntBASIC0.78□□□□□ -2.28
LINC01549A6NIU2 Z77249.1-201ENST00000444622 1175 ntBASIC0.78□□□□□ -2.28
LINC01549A6NIU2 MTCO1P48-201ENST00000448024 1096 ntBASIC0.78□□□□□ -2.28
LINC01549A6NIU2 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC0.78□□□□□ -2.28
LINC01549A6NIU2 BX248409.1-201ENST00000455497 255 ntBASIC0.78□□□□□ -2.28
LINC01549A6NIU2 AL359385.1-201ENST00000456509 365 ntBASIC0.78□□□□□ -2.28
LINC01549A6NIU2 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.78□□□□□ -2.28
LINC01549A6NIU2 AC004223.1-201ENST00000479840 271 ntBASIC0.78□□□□□ -2.28
LINC01549A6NIU2 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.78□□□□□ -2.28
LINC01549A6NIU2 AC008837.1-201ENST00000511513 412 ntBASIC0.78□□□□□ -2.28
LINC01549A6NIU2 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC0.78□□□□□ -2.28
LINC01549A6NIU2 AP005205.1-201ENST00000563503 508 ntBASIC0.78□□□□□ -2.28
LINC01549A6NIU2 MIR3198-2-201ENST00000577868 80 ntBASIC0.78□□□□□ -2.28
LINC01549A6NIU2 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC0.78□□□□□ -2.28
LINC01549A6NIU2 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.78□□□□□ -2.28
LINC01549A6NIU2 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC0.78□□□□□ -2.28
LINC01549A6NIU2 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
LINC01549A6NIU2 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC0.78□□□□□ -2.28
LINC01549A6NIU2 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
LINC01549A6NIU2 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
LINC01549A6NIU2 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
LINC01549A6NIU2 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
LINC01549A6NIU2 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.77□□□□□ -2.29
LINC01549A6NIU2 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
LINC01549A6NIU2 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.77□□□□□ -2.29
LINC01549A6NIU2 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.77□□□□□ -2.29
LINC01549A6NIU2 AL122016.1-201ENST00000403365 367 ntBASIC0.77□□□□□ -2.29
LINC01549A6NIU2 PIGPP2-201ENST00000411569 458 ntBASIC0.77□□□□□ -2.29
LINC01549A6NIU2 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC0.77□□□□□ -2.29
LINC01549A6NIU2 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC0.77□□□□□ -2.29
LINC01549A6NIU2 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC0.77□□□□□ -2.29
LINC01549A6NIU2 RPL23AP76-201ENST00000441860 458 ntBASIC0.77□□□□□ -2.29
LINC01549A6NIU2 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC0.77□□□□□ -2.29
LINC01549A6NIU2 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.77□□□□□ -2.29
LINC01549A6NIU2 TRBV8-1-201ENST00000481590 279 ntBASIC0.77□□□□□ -2.29
LINC01549A6NIU2 AC139453.3-201ENST00000493276 369 ntBASIC0.77□□□□□ -2.29
LINC01549A6NIU2 PCNAP1-201ENST00000505363 709 ntBASIC0.77□□□□□ -2.29
LINC01549A6NIU2 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC0.77□□□□□ -2.29
LINC01549A6NIU2 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC0.77□□□□□ -2.29
LINC01549A6NIU2 AP005660.1-201ENST00000522972 293 ntBASIC0.77□□□□□ -2.29
LINC01549A6NIU2 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.77□□□□□ -2.29
LINC01549A6NIU2 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.77□□□□□ -2.29
LINC01549A6NIU2 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.77□□□□□ -2.29
LINC01549A6NIU2 AC067805.1-201ENST00000559344 470 ntBASIC0.77□□□□□ -2.29
LINC01549A6NIU2 AC090888.1-201ENST00000561335 1141 ntBASIC0.77□□□□□ -2.29
LINC01549A6NIU2 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.77□□□□□ -2.29
LINC01549A6NIU2 MIR3609-201ENST00000582661 80 ntBASIC0.77□□□□□ -2.29
LINC01549A6NIU2 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC0.77□□□□□ -2.29
LINC01549A6NIU2 AC025588.2-201ENST00000604851 466 ntBASIC0.77□□□□□ -2.29
LINC01549A6NIU2 AC016925.2-201ENST00000605108 242 ntBASIC0.77□□□□□ -2.29
LINC01549A6NIU2 AC021646.1-201ENST00000605469 484 ntBASIC0.77□□□□□ -2.29
LINC01549A6NIU2 AL391834.1-201ENST00000609609 560 ntBASIC0.77□□□□□ -2.29
LINC01549A6NIU2 AL392048.1-201ENST00000613946 534 ntBASIC0.77□□□□□ -2.29
LINC01549A6NIU2 AL355810.1-201ENST00000614629 552 ntBASIC0.77□□□□□ -2.29
LINC01549A6NIU2 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
LINC01549A6NIU2 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC0.77□□□□□ -2.29
LINC01549A6NIU2 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
LINC01549A6NIU2 SLC9B1P2-201ENST00000398120 1184 ntBASIC0.76□□□□□ -2.29
LINC01549A6NIU2 TANK-206ENST00000406287 875 ntTSL 5 BASIC0.76□□□□□ -2.29
LINC01549A6NIU2 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC0.76□□□□□ -2.29
LINC01549A6NIU2 HMGB3P31-201ENST00000413333 595 ntBASIC0.76□□□□□ -2.29
LINC01549A6NIU2 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.76□□□□□ -2.29
LINC01549A6NIU2 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.76□□□□□ -2.29
LINC01549A6NIU2 RPL7L1P10-201ENST00000427790 463 ntBASIC0.76□□□□□ -2.29
LINC01549A6NIU2 FABP5P3-201ENST00000437960 408 ntBASIC0.76□□□□□ -2.29
LINC01549A6NIU2 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.76□□□□□ -2.29
LINC01549A6NIU2 AC092393.1-201ENST00000439625 742 ntBASIC0.76□□□□□ -2.29
LINC01549A6NIU2 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC0.76□□□□□ -2.29
LINC01549A6NIU2 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC0.76□□□□□ -2.29
LINC01549A6NIU2 TPTE2P6-202ENST00000445572 1007 ntBASIC0.76□□□□□ -2.29
LINC01549A6NIU2 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC0.76□□□□□ -2.29
LINC01549A6NIU2 APOA2-205ENST00000468465 421 ntTSL 2 BASIC0.76□□□□□ -2.29
LINC01549A6NIU2 PABPC1P3-201ENST00000469174 459 ntBASIC0.76□□□□□ -2.29
LINC01549A6NIU2 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
LINC01549A6NIU2 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.76□□□□□ -2.29
LINC01549A6NIU2 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.76□□□□□ -2.29
LINC01549A6NIU2 AC093752.1-206ENST00000511823 336 ntBASIC0.76□□□□□ -2.29
LINC01549A6NIU2 SNORA31.8-201ENST00000516327 108 ntBASIC0.76□□□□□ -2.29
LINC01549A6NIU2 AC118273.2-201ENST00000532092 465 ntBASIC0.76□□□□□ -2.29
LINC01549A6NIU2 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms