Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC0.66□□□□□ -2.3
LINC01546A6NGU7 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
LINC01546A6NGU7 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC0.66□□□□□ -2.3
LINC01546A6NGU7 AP003497.1-201ENST00000528472 562 ntBASIC0.66□□□□□ -2.3
LINC01546A6NGU7 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.66□□□□□ -2.3
LINC01546A6NGU7 RN7SL371P-201ENST00000578099 267 ntBASIC0.66□□□□□ -2.3
LINC01546A6NGU7 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.66□□□□□ -2.3
LINC01546A6NGU7 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC0.66□□□□□ -2.3
LINC01546A6NGU7 AC011471.1-201ENST00000585766 187 ntBASIC0.66□□□□□ -2.3
LINC01546A6NGU7 DUSP12P1-201ENST00000612874 516 ntBASIC0.66□□□□□ -2.3
LINC01546A6NGU7 AC242843.1-201ENST00000618702 573 ntBASIC0.66□□□□□ -2.3
LINC01546A6NGU7 AP003485.1-201ENST00000625093 753 ntBASIC0.66□□□□□ -2.3
LINC01546A6NGU7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC0.66□□□□□ -2.3
LINC01546A6NGU7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.66□□□□□ -2.3
LINC01546A6NGU7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
LINC01546A6NGU7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.66□□□□□ -2.3
LINC01546A6NGU7 AP000776.1-201ENST00000530032 1663 ntBASIC0.65□□□□□ -2.3
LINC01546A6NGU7 PAPPA-AS1-201ENST00000445861 2450 ntBASIC0.65□□□□□ -2.3
LINC01546A6NGU7 AL589655.1-201ENST00000405398 482 ntBASIC0.65□□□□□ -2.31
LINC01546A6NGU7 RN7SKP61-201ENST00000410642 295 ntBASIC0.65□□□□□ -2.31
LINC01546A6NGU7 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC0.65□□□□□ -2.31
LINC01546A6NGU7 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.65□□□□□ -2.31
LINC01546A6NGU7 AC008379.1-201ENST00000463655 464 ntBASIC0.65□□□□□ -2.31
LINC01546A6NGU7 AC103851.1-201ENST00000506833 274 ntBASIC0.65□□□□□ -2.31
LINC01546A6NGU7 FAM206BP-201ENST00000510179 541 ntBASIC0.65□□□□□ -2.31
LINC01546A6NGU7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.65□□□□□ -2.31
LINC01546A6NGU7 RNU6-351P-201ENST00000516097 100 ntBASIC0.65□□□□□ -2.31
LINC01546A6NGU7 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC0.65□□□□□ -2.31
LINC01546A6NGU7 AC106782.4-201ENST00000568264 210 ntBASIC0.65□□□□□ -2.31
LINC01546A6NGU7 MIR4303-201ENST00000581299 66 ntBASIC0.65□□□□□ -2.31
LINC01546A6NGU7 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC0.65□□□□□ -2.31
LINC01546A6NGU7 AC091925.2-201ENST00000625059 256 ntBASIC0.65□□□□□ -2.31
LINC01546A6NGU7 AC026634.1-201ENST00000634369 198 ntBASIC0.65□□□□□ -2.31
LINC01546A6NGU7 MIR4496-201ENST00000635896 61 ntBASIC0.65□□□□□ -2.31
LINC01546A6NGU7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.65□□□□□ -2.31
LINC01546A6NGU7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.64□□□□□ -2.31
LINC01546A6NGU7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
LINC01546A6NGU7 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.64□□□□□ -2.31
LINC01546A6NGU7 U3.20-201ENST00000390909 217 ntBASIC0.64□□□□□ -2.31
LINC01546A6NGU7 RPL23AP29-201ENST00000397284 453 ntBASIC0.64□□□□□ -2.31
LINC01546A6NGU7 AL035405.1-201ENST00000400795 710 ntBASIC0.64□□□□□ -2.31
LINC01546A6NGU7 AC244636.1-201ENST00000421152 228 ntBASIC0.64□□□□□ -2.31
LINC01546A6NGU7 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.64□□□□□ -2.31
LINC01546A6NGU7 AC009414.1-201ENST00000427200 443 ntBASIC0.64□□□□□ -2.31
LINC01546A6NGU7 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.64□□□□□ -2.31
LINC01546A6NGU7 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC0.64□□□□□ -2.31
LINC01546A6NGU7 HMGB1P48-201ENST00000446155 598 ntBASIC0.64□□□□□ -2.31
LINC01546A6NGU7 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC0.64□□□□□ -2.31
LINC01546A6NGU7 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC0.64□□□□□ -2.31
LINC01546A6NGU7 MTND3P6-201ENST00000485242 339 ntBASIC0.64□□□□□ -2.31
LINC01546A6NGU7 AC008526.1-201ENST00000509149 338 ntBASIC0.64□□□□□ -2.31
LINC01546A6NGU7 AC093752.1-206ENST00000511823 336 ntBASIC0.64□□□□□ -2.31
LINC01546A6NGU7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.64□□□□□ -2.31
LINC01546A6NGU7 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC0.64□□□□□ -2.31
LINC01546A6NGU7 AC079148.1-201ENST00000565944 819 ntBASIC0.64□□□□□ -2.31
LINC01546A6NGU7 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.64□□□□□ -2.31
LINC01546A6NGU7 AC016925.2-201ENST00000605108 242 ntBASIC0.64□□□□□ -2.31
LINC01546A6NGU7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.64□□□□□ -2.31
LINC01546A6NGU7 AL359893.1-201ENST00000447628 1580 ntBASIC0.64□□□□□ -2.31
LINC01546A6NGU7 CR848007.1-201ENST00000442354 1699 ntBASIC0.63□□□□□ -2.31
LINC01546A6NGU7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
LINC01546A6NGU7 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
LINC01546A6NGU7 RNU6-629P-201ENST00000384061 103 ntBASIC0.63□□□□□ -2.31
LINC01546A6NGU7 SNORA70B-201ENST00000384210 135 ntBASIC0.63□□□□□ -2.31
LINC01546A6NGU7 MIR634-201ENST00000385208 97 ntBASIC0.63□□□□□ -2.31
LINC01546A6NGU7 RPS3AP24-201ENST00000407896 734 ntBASIC0.63□□□□□ -2.31
LINC01546A6NGU7 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
LINC01546A6NGU7 AL158823.1-201ENST00000418441 478 ntBASIC0.63□□□□□ -2.31
LINC01546A6NGU7 SNRPEP10-201ENST00000420249 274 ntBASIC0.63□□□□□ -2.31
LINC01546A6NGU7 AC092047.1-201ENST00000424997 240 ntBASIC0.63□□□□□ -2.31
LINC01546A6NGU7 AC092634.2-201ENST00000428146 1010 ntBASIC0.63□□□□□ -2.31
LINC01546A6NGU7 HMGB1P27-201ENST00000431429 603 ntBASIC0.63□□□□□ -2.31
LINC01546A6NGU7 FABP5P3-201ENST00000437960 408 ntBASIC0.63□□□□□ -2.31
LINC01546A6NGU7 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC0.63□□□□□ -2.31
LINC01546A6NGU7 TPTE2P6-202ENST00000445572 1007 ntBASIC0.63□□□□□ -2.31
LINC01546A6NGU7 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.63□□□□□ -2.31
LINC01546A6NGU7 RPL39P28-201ENST00000465655 155 ntBASIC0.63□□□□□ -2.31
LINC01546A6NGU7 AC112518.2-201ENST00000508565 425 ntBASIC0.63□□□□□ -2.31
LINC01546A6NGU7 AC008837.1-201ENST00000511513 412 ntBASIC0.63□□□□□ -2.31
LINC01546A6NGU7 RN7SKP5-201ENST00000517045 272 ntBASIC0.63□□□□□ -2.31
LINC01546A6NGU7 AL442163.2-201ENST00000553912 710 ntBASIC0.63□□□□□ -2.31
LINC01546A6NGU7 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.63□□□□□ -2.31
LINC01546A6NGU7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.63□□□□□ -2.31
LINC01546A6NGU7 AC116563.2-201ENST00000624751 535 ntBASIC0.63□□□□□ -2.31
LINC01546A6NGU7 MTND5P9-201ENST00000503854 1755 ntBASIC0.62□□□□□ -2.31
LINC01546A6NGU7 ZNF33BP1-201ENST00000452497 1834 ntBASIC0.62□□□□□ -2.31
LINC01546A6NGU7 SNORD114-2-201ENST00000363953 78 ntBASIC0.62□□□□□ -2.31
LINC01546A6NGU7 MIR146A-201ENST00000385201 99 ntBASIC0.62□□□□□ -2.31
LINC01546A6NGU7 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
LINC01546A6NGU7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.62□□□□□ -2.31
LINC01546A6NGU7 DYNLT3P2-201ENST00000442517 295 ntBASIC0.62□□□□□ -2.31
LINC01546A6NGU7 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.62□□□□□ -2.31
LINC01546A6NGU7 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.62□□□□□ -2.31
LINC01546A6NGU7 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC0.62□□□□□ -2.31
LINC01546A6NGU7 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
LINC01546A6NGU7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.62□□□□□ -2.31
LINC01546A6NGU7 AC116337.1-201ENST00000509680 687 ntBASIC0.62□□□□□ -2.31
LINC01546A6NGU7 RNU1-41P-201ENST00000516161 162 ntBASIC0.62□□□□□ -2.31
LINC01546A6NGU7 RNU1-48P-201ENST00000516400 162 ntBASIC0.62□□□□□ -2.31
LINC01546A6NGU7 DNAJC19P9-201ENST00000555084 351 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms