Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 ELF2P3-201ENST00000445099 1506 ntBASIC3.7□□□□□ -1.82
TBC1D3FA6NER0 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TBC1D3FA6NER0 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 SNORA51.2-201ENST00000364595 132 ntBASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 AC068050.1-201ENST00000394891 380 ntBASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 SOD2P1-201ENST00000396543 562 ntBASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 RPS4XP8-201ENST00000402039 771 ntBASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 MED13P1-201ENST00000428342 171 ntBASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 USP12PX-201ENST00000432383 1057 ntBASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 VDAC1P3-201ENST00000434069 851 ntBASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 RPS20P5-201ENST00000434808 360 ntBASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 MTATP6P30-201ENST00000443540 664 ntBASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 PRDX3P3-201ENST00000447765 522 ntBASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 SNORD105B-201ENST00000458770 79 ntBASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 HSPE1P6-201ENST00000479457 291 ntBASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 HSPD1P15-201ENST00000505573 1122 ntBASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 RNU6-390P-201ENST00000516259 103 ntBASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 OR5D17P-201ENST00000531492 978 ntBASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 AP003034.1-201ENST00000534621 422 ntBASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 AL359212.1-201ENST00000556608 614 ntBASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 AC012507.3-201ENST00000603556 477 ntBASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 AC010133.1-201ENST00000615809 842 ntBASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 AC139792.3-201ENST00000623525 224 ntBASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TBC1D3FA6NER0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 XIAPP3-201ENST00000312918 795 ntBASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 RNU6-1120P-201ENST00000362988 108 ntBASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 RNU6-188P-201ENST00000364207 107 ntBASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 RNU4-12P-201ENST00000365233 139 ntBASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 SNORD115-47-201ENST00000391226 86 ntBASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 AC245054.1-201ENST00000420944 258 ntBASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 AC093106.2-201ENST00000428212 385 ntBASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 AC073063.1-201ENST00000434352 607 ntBASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 RPL23AP20-201ENST00000447965 421 ntBASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 MTND2P24-201ENST00000453434 806 ntBASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 AC105914.1-201ENST00000511798 226 ntBASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 SUMO2P20-201ENST00000520803 283 ntBASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 AC008011.1-201ENST00000545989 227 ntBASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 AC093012.1-202ENST00000549403 582 ntBASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 HMGB1P33-201ENST00000563485 527 ntBASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 MIR3690-201ENST00000580266 75 ntBASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 AC012468.1-201ENST00000604888 430 ntBASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 AP001596.2-201ENST00000608410 312 ntBASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 SDR42E1P2-201ENST00000614861 481 ntBASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.68□□□□□ -1.82
TBC1D3FA6NER0 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 MAPK10-372ENST00000641954 3413 ntBASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 DEFB108F-201ENST00000344638 222 ntBASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 RNU6-1085P-201ENST00000363576 107 ntBASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 RNA5SP322-201ENST00000363617 119 ntBASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 RNA5SP72-201ENST00000364442 117 ntBASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 Y_RNA.367-201ENST00000365544 101 ntBASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 MIR183-201ENST00000384958 110 ntBASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 MIR34B-201ENST00000385076 84 ntBASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TBC1D3FA6NER0 HLFP1-201ENST00000402375 499 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms