Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAV13-2A0A0B4J235 RAB11AP1-201ENST00000442978 646 ntBASIC1.09□□□□□ -2.23
TRAV13-2A0A0B4J235 RPS26P30-201ENST00000443431 335 ntBASIC1.09□□□□□ -2.23
TRAV13-2A0A0B4J235 HMGN1P5-201ENST00000448591 263 ntBASIC1.09□□□□□ -2.23
TRAV13-2A0A0B4J235 NDUFAF4P3-201ENST00000456468 525 ntBASIC1.09□□□□□ -2.23
TRAV13-2A0A0B4J235 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAV13-2A0A0B4J235 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAV13-2A0A0B4J235 AC096576.1-201ENST00000489014 359 ntBASIC1.09□□□□□ -2.23
TRAV13-2A0A0B4J235 AC021146.2-201ENST00000504736 556 ntBASIC1.09□□□□□ -2.23
TRAV13-2A0A0B4J235 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.09□□□□□ -2.23
TRAV13-2A0A0B4J235 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAV13-2A0A0B4J235 SCARNA3-201ENST00000517097 143 ntBASIC1.09□□□□□ -2.23
TRAV13-2A0A0B4J235 AP005597.4-201ENST00000526762 229 ntBASIC1.09□□□□□ -2.23
TRAV13-2A0A0B4J235 AC084851.1-201ENST00000529105 249 ntBASIC1.09□□□□□ -2.23
TRAV13-2A0A0B4J235 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.09□□□□□ -2.23
TRAV13-2A0A0B4J235 MIR1273D-201ENST00000577266 86 ntBASIC1.09□□□□□ -2.23
TRAV13-2A0A0B4J235 CBX3P2-202ENST00000583365 535 ntBASIC1.09□□□□□ -2.23
TRAV13-2A0A0B4J235 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.09□□□□□ -2.23
TRAV13-2A0A0B4J235 AC008121.1-201ENST00000603244 268 ntBASIC1.09□□□□□ -2.23
TRAV13-2A0A0B4J235 AC010738.1-201ENST00000604970 987 ntBASIC1.09□□□□□ -2.23
TRAV13-2A0A0B4J235 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.09□□□□□ -2.23
TRAV13-2A0A0B4J235 AL109659.3-201ENST00000624985 950 ntBASIC1.09□□□□□ -2.23
TRAV13-2A0A0B4J235 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.09□□□□□ -2.24
TRAV13-2A0A0B4J235 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
TRAV13-2A0A0B4J235 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 AC092881.1-201ENST00000638218 2733 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 RNA5SP289-201ENST00000362332 137 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 RNU6-1155P-201ENST00000363554 107 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 RNU6-1083P-201ENST00000384022 107 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 MIR325-201ENST00000385260 98 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 MIR1290-201ENST00000408735 78 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 RN7SKP32-201ENST00000410167 303 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 EDDM3CP-201ENST00000415977 425 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 SPA17P1-201ENST00000416656 452 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 LINC01347-201ENST00000417964 355 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 AC244636.1-201ENST00000421152 228 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 AL512844.2-201ENST00000433990 593 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 RAC1P7-201ENST00000445367 377 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 DDX3P2-201ENST00000446138 111 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 SETP6-201ENST00000479329 568 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 ANXA2P1-201ENST00000505539 926 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 Y_RNA.675-201ENST00000516389 149 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 HSPE1P18-201ENST00000517602 280 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 EIF4BP1-201ENST00000554881 351 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 AL391261.3-201ENST00000557194 520 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 HMGN2P15-201ENST00000585707 270 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 AC013444.2-201ENST00000603317 787 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 AL078605.1-201ENST00000603529 500 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 AC068944.2-201ENST00000610373 403 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 AL592148.2-201ENST00000612210 372 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 AC068722.2-201ENST00000618734 544 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 AL162233.1-201ENST00000620014 944 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 AP002791.1-201ENST00000623291 381 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 MIR7157-201ENST00000635801 60 ntBASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.08□□□□□ -2.24
TRAV13-2A0A0B4J235 MIR218-1-201ENST00000384999 110 ntBASIC1.07□□□□□ -2.24
TRAV13-2A0A0B4J235 TAF9BP2-201ENST00000400856 499 ntBASIC1.07□□□□□ -2.24
TRAV13-2A0A0B4J235 AL023284.1-201ENST00000403956 276 ntBASIC1.07□□□□□ -2.24
TRAV13-2A0A0B4J235 SNORA11B-201ENST00000408175 129 ntBASIC1.07□□□□□ -2.24
TRAV13-2A0A0B4J235 VTA1P1-201ENST00000414044 866 ntBASIC1.07□□□□□ -2.24
TRAV13-2A0A0B4J235 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV13-2A0A0B4J235 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV13-2A0A0B4J235 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV13-2A0A0B4J235 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV13-2A0A0B4J235 AL831737.1-201ENST00000441288 271 ntBASIC1.07□□□□□ -2.24
TRAV13-2A0A0B4J235 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.07□□□□□ -2.24
TRAV13-2A0A0B4J235 AL357134.1-201ENST00000445848 426 ntBASIC1.07□□□□□ -2.24
TRAV13-2A0A0B4J235 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
TRAV13-2A0A0B4J235 AC080013.2-201ENST00000460866 323 ntBASIC1.07□□□□□ -2.24
TRAV13-2A0A0B4J235 HMGN1P8-201ENST00000463578 288 ntBASIC1.07□□□□□ -2.24
TRAV13-2A0A0B4J235 HSPE1P6-201ENST00000479457 291 ntBASIC1.07□□□□□ -2.24
TRAV13-2A0A0B4J235 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV13-2A0A0B4J235 AC114786.4-201ENST00000508771 728 ntBASIC1.07□□□□□ -2.24
TRAV13-2A0A0B4J235 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
TRAV13-2A0A0B4J235 LTV1P1-201ENST00000510683 1237 ntBASIC1.07□□□□□ -2.24
TRAV13-2A0A0B4J235 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.07□□□□□ -2.24
TRAV13-2A0A0B4J235 AC114797.1-201ENST00000514003 728 ntBASIC1.07□□□□□ -2.24
TRAV13-2A0A0B4J235 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC1.07□□□□□ -2.24
TRAV13-2A0A0B4J235 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.07□□□□□ -2.24
TRAV13-2A0A0B4J235 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.07□□□□□ -2.24
TRAV13-2A0A0B4J235 MIR3162-201ENST00000581818 82 ntBASIC1.07□□□□□ -2.24
TRAV13-2A0A0B4J235 AC105224.1-201ENST00000587055 421 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms