Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC7.28□□□□□ -1.24
CCDC61Q9Y6R9 SCARNA20.4-201ENST00000516969 131 ntBASIC7.28□□□□□ -1.24
CCDC61Q9Y6R9 MTND5P34-201ENST00000568888 325 ntBASIC7.28□□□□□ -1.24
CCDC61Q9Y6R9 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC7.28□□□□□ -1.24
CCDC61Q9Y6R9 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC61Q9Y6R9 AC068831.7-201ENST00000616954 363 ntBASIC7.28□□□□□ -1.24
CCDC61Q9Y6R9 MIR6130-201ENST00000619419 109 ntBASIC7.28□□□□□ -1.24
CCDC61Q9Y6R9 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CCDC61Q9Y6R9 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC61Q9Y6R9 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
CCDC61Q9Y6R9 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC7.28□□□□□ -1.24
CCDC61Q9Y6R9 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
CCDC61Q9Y6R9 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC7.28□□□□□ -1.24
CCDC61Q9Y6R9 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC61Q9Y6R9 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC7.28□□□□□ -1.24
CCDC61Q9Y6R9 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
CCDC61Q9Y6R9 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 AC008758.3-201ENST00000507003 1829 ntBASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 NLN-202ENST00000502464 8354 ntTSL 5 BASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 FTLP6-201ENST00000355274 422 ntBASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 Y_RNA.230-201ENST00000364348 109 ntBASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 RN7SKP284-201ENST00000411002 343 ntBASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 DDX39BP1-205ENST00000422507 192 ntBASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 RPS20P1-201ENST00000434853 354 ntBASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 KNOP1P3-201ENST00000446933 426 ntBASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 AC103996.1-201ENST00000555468 102 ntBASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 AC008814.1-201ENST00000603797 406 ntBASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 AC087385.3-201ENST00000620477 187 ntBASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 AL365440.1-201ENST00000436135 2167 ntBASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 ALB-214ENST00000509063 1911 ntTSL 5 BASIC7.27□□□□□ -1.25
CCDC61Q9Y6R9 AL591135.1-201ENST00000401578 5914 ntBASIC7.26□□□□□ -1.25
CCDC61Q9Y6R9 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC61Q9Y6R9 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC61Q9Y6R9 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC7.26□□□□□ -1.25
CCDC61Q9Y6R9 RNU6-227P-201ENST00000362865 103 ntBASIC7.26□□□□□ -1.25
CCDC61Q9Y6R9 SNORD56.6-201ENST00000384569 71 ntBASIC7.26□□□□□ -1.25
CCDC61Q9Y6R9 CTSL3P-202ENST00000412179 788 ntBASIC7.26□□□□□ -1.25
CCDC61Q9Y6R9 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC7.26□□□□□ -1.25
CCDC61Q9Y6R9 MRPS33P2-201ENST00000507850 322 ntBASIC7.26□□□□□ -1.25
CCDC61Q9Y6R9 AK3P2-201ENST00000507976 429 ntBASIC7.26□□□□□ -1.25
CCDC61Q9Y6R9 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC7.26□□□□□ -1.25
CCDC61Q9Y6R9 AC008033.2-201ENST00000542626 177 ntBASIC7.26□□□□□ -1.25
CCDC61Q9Y6R9 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC7.26□□□□□ -1.25
CCDC61Q9Y6R9 U4.7-201ENST00000638126 106 ntBASIC7.26□□□□□ -1.25
CCDC61Q9Y6R9 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.26□□□□□ -1.25
CCDC61Q9Y6R9 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
CCDC61Q9Y6R9 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
CCDC61Q9Y6R9 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC61Q9Y6R9 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC61Q9Y6R9 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC61Q9Y6R9 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC61Q9Y6R9 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC61Q9Y6R9 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC61Q9Y6R9 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC7.25□□□□□ -1.25
CCDC61Q9Y6R9 MAPK10-270ENST00000641102 3538 ntBASIC7.25□□□□□ -1.25
CCDC61Q9Y6R9 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC61Q9Y6R9 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC61Q9Y6R9 RNU6-512P-201ENST00000364438 103 ntBASIC7.25□□□□□ -1.25
CCDC61Q9Y6R9 RNA5SP87-201ENST00000384155 118 ntBASIC7.25□□□□□ -1.25
CCDC61Q9Y6R9 Y_RNA.534-201ENST00000384599 112 ntBASIC7.25□□□□□ -1.25
CCDC61Q9Y6R9 RPS12P23-201ENST00000419579 400 ntBASIC7.25□□□□□ -1.25
CCDC61Q9Y6R9 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC7.25□□□□□ -1.25
CCDC61Q9Y6R9 RPS20P10-201ENST00000451209 253 ntBASIC7.25□□□□□ -1.25
CCDC61Q9Y6R9 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC7.25□□□□□ -1.25
CCDC61Q9Y6R9 IGLV2-34-201ENST00000490007 283 ntBASIC7.25□□□□□ -1.25
CCDC61Q9Y6R9 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC7.25□□□□□ -1.25
CCDC61Q9Y6R9 AC022616.8-201ENST00000533569 253 ntBASIC7.25□□□□□ -1.25
CCDC61Q9Y6R9 AC090049.2-201ENST00000550377 109 ntBASIC7.25□□□□□ -1.25
CCDC61Q9Y6R9 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC7.25□□□□□ -1.25
CCDC61Q9Y6R9 AL645944.1-201ENST00000603857 493 ntBASIC7.25□□□□□ -1.25
CCDC61Q9Y6R9 AL591926.8-201ENST00000616876 211 ntBASIC7.25□□□□□ -1.25
CCDC61Q9Y6R9 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
CCDC61Q9Y6R9 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC61Q9Y6R9 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 AC009962.1-201ENST00000567327 3813 ntBASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC61Q9Y6R9 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms