Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AC093655.2-201ENST00000425735 631 ntBASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 MTATP6P4-201ENST00000427725 675 ntBASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 AL358472.1-201ENST00000431295 329 ntBASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 RPS20P1-201ENST00000434853 354 ntBASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 AC104164.2-201ENST00000496953 495 ntBASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 RNU6-1012P-201ENST00000516606 109 ntBASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 RNA5SP471-201ENST00000516971 106 ntBASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 AC234771.5-201ENST00000600161 514 ntBASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 SRGNP1-201ENST00000603392 451 ntBASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 SUMO2P15-201ENST00000604285 278 ntBASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 AL133481.2-203ENST00000607558 139 ntBASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.16□□□□□ -1.58
HRH3Q9Y5N1 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.15□□□□□ -1.58
HRH3Q9Y5N1 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
HRH3Q9Y5N1 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
HRH3Q9Y5N1 AC104964.3-201ENST00000606115 2860 ntBASIC5.15□□□□□ -1.58
HRH3Q9Y5N1 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HRH3Q9Y5N1 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.15□□□□□ -1.58
HRH3Q9Y5N1 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HRH3Q9Y5N1 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
HRH3Q9Y5N1 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.15□□□□□ -1.58
HRH3Q9Y5N1 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.15□□□□□ -1.58
HRH3Q9Y5N1 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.15□□□□□ -1.59
HRH3Q9Y5N1 SNORA58B-201ENST00000364259 136 ntBASIC5.15□□□□□ -1.59
HRH3Q9Y5N1 RN7SKP227-201ENST00000364445 330 ntBASIC5.15□□□□□ -1.59
HRH3Q9Y5N1 SNORD50.2-201ENST00000365465 70 ntBASIC5.15□□□□□ -1.59
HRH3Q9Y5N1 MTCO1P5-201ENST00000433573 344 ntBASIC5.15□□□□□ -1.59
HRH3Q9Y5N1 AC091021.1-201ENST00000468051 388 ntBASIC5.15□□□□□ -1.59
HRH3Q9Y5N1 HSPE1P6-201ENST00000479457 291 ntBASIC5.15□□□□□ -1.59
HRH3Q9Y5N1 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.15□□□□□ -1.59
HRH3Q9Y5N1 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.15□□□□□ -1.59
HRH3Q9Y5N1 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.15□□□□□ -1.59
HRH3Q9Y5N1 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.15□□□□□ -1.59
HRH3Q9Y5N1 RPL21P7-201ENST00000557463 483 ntBASIC5.15□□□□□ -1.59
HRH3Q9Y5N1 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.15□□□□□ -1.59
HRH3Q9Y5N1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.15□□□□□ -1.59
HRH3Q9Y5N1 AC090617.3-201ENST00000573670 475 ntBASIC5.15□□□□□ -1.59
HRH3Q9Y5N1 FKBP1AP1-201ENST00000594588 318 ntBASIC5.15□□□□□ -1.59
HRH3Q9Y5N1 AL162424.1-201ENST00000602325 221 ntBASIC5.15□□□□□ -1.59
HRH3Q9Y5N1 AC093799.2-201ENST00000610062 578 ntBASIC5.15□□□□□ -1.59
HRH3Q9Y5N1 AC079776.5-201ENST00000641920 211 ntBASIC5.15□□□□□ -1.59
HRH3Q9Y5N1 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
HRH3Q9Y5N1 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HRH3Q9Y5N1 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.15□□□□□ -1.59
HRH3Q9Y5N1 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 Y_RNA.123-201ENST00000363338 102 ntBASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 RNA5SP234-201ENST00000363916 119 ntBASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 RNU6-384P-201ENST00000364900 104 ntBASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 SNORD63-201ENST00000384262 68 ntBASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 MIR34A-201ENST00000385130 110 ntBASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 RPL19P1-201ENST00000411635 428 ntBASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 EIF1P2-201ENST00000428233 350 ntBASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 CKS1BP5-201ENST00000434172 273 ntBASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 RPL21P13-201ENST00000488305 481 ntBASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 RN7SL547P-201ENST00000490793 290 ntBASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 AC008953.1-201ENST00000497334 318 ntBASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 AC074198.2-201ENST00000508153 258 ntBASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 Y_RNA.679-201ENST00000516416 91 ntBASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 AC022968.1-201ENST00000567372 442 ntBASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 AL645944.1-201ENST00000603857 493 ntBASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 AL162431.4-201ENST00000604674 411 ntBASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
HRH3Q9Y5N1 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HRH3Q9Y5N1 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms