Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 AL035413.2-201ENST00000604801 525 ntBASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 AC091167.4-201ENST00000605079 184 ntBASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 RMST_3.1-201ENST00000611651 109 ntBASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 AC025253.1-201ENST00000613623 543 ntBASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 SDR42E1P2-201ENST00000614861 481 ntBASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 uc_338.32-201ENST00000615087 172 ntBASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 AC068831.8-201ENST00000620171 435 ntBASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 MIR6830-201ENST00000636015 70 ntBASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 AC010733.2-201ENST00000589496 5702 ntBASIC4.09□□□□□ -1.75
PCDHA3Q9Y5H8 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.09□□□□□ -1.76
PCDHA3Q9Y5H8 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.76
PCDHA3Q9Y5H8 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.09□□□□□ -1.76
PCDHA3Q9Y5H8 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.09□□□□□ -1.76
PCDHA3Q9Y5H8 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 SNORA62.1-201ENST00000364287 154 ntBASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 SMIM11P1-201ENST00000369586 178 ntBASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 SNORA24.1-201ENST00000384401 135 ntBASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 RNU6-1068P-201ENST00000410958 103 ntBASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 RNU6-373P-201ENST00000411247 98 ntBASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 AC114491.1-201ENST00000416095 246 ntBASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 AC092017.2-201ENST00000427600 362 ntBASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 AP000873.1-201ENST00000463987 400 ntBASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 AC078918.1-201ENST00000498515 228 ntBASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 RNU6-390P-201ENST00000516259 103 ntBASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 RN7SKP219-201ENST00000516825 296 ntBASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 RNA5SP179-201ENST00000517284 121 ntBASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 AC103843.2-201ENST00000530523 682 ntBASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 OR5AL2P-201ENST00000532185 920 ntBASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 AL138976.2-201ENST00000563989 694 ntBASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 AC005255.1-201ENST00000593748 216 ntBASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 AP001350.1-201ENST00000601906 1524 ntBASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 AC174048.1-201ENST00000603389 144 ntBASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 AC010133.1-201ENST00000615809 842 ntBASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 AC007998.5-201ENST00000622938 237 ntBASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 MAPK10-373ENST00000641983 6772 ntBASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHA3Q9Y5H8 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 XIAPP3-201ENST00000312918 795 ntBASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 RNU6-61P-201ENST00000365528 109 ntBASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 NDUFS5P1-201ENST00000405668 289 ntBASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 RNU2-29P-201ENST00000410423 189 ntBASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 RNU6-387P-201ENST00000411331 105 ntBASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 MTND4P25-201ENST00000441039 533 ntBASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 AC068587.1-201ENST00000483613 781 ntBASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 AC106872.2-201ENST00000494303 480 ntBASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 RPL38P4-201ENST00000502376 214 ntBASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 RN7SKP122-201ENST00000515923 296 ntBASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 SUMO2P20-201ENST00000520803 283 ntBASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 AP005435.4-201ENST00000529514 284 ntBASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 AC023575.1-201ENST00000580510 358 ntBASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 AP001029.3-201ENST00000588063 596 ntBASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 BRDTP1-201ENST00000605735 677 ntBASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 AL357078.3-201ENST00000607528 618 ntBASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 AC006504.8-201ENST00000621046 635 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms