Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 AL392103.1-201ENST00000447000 198 ntBASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 AL138752.1-201ENST00000452964 351 ntBASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 COX6B1P2-201ENST00000489624 230 ntBASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 AL160314.1-201ENST00000490836 438 ntBASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 ENPP7P11-201ENST00000505915 627 ntBASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 RNU6-612P-201ENST00000516909 102 ntBASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 SCARNA20.4-201ENST00000516969 131 ntBASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 AC103996.1-201ENST00000555468 102 ntBASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 MIR4505-201ENST00000582238 73 ntBASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 BX284668.6-201ENST00000606899 438 ntBASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PCDHGA11Q9Y5H2 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 SAMMSON-213ENST00000641336 1521 ntBASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 AC004925.1-201ENST00000624256 2706 ntBASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 SNORD50.1-201ENST00000362987 71 ntBASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 MIR34A-201ENST00000385130 110 ntBASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 SNORA68.2-201ENST00000391263 128 ntBASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 AC005522.1-201ENST00000395416 346 ntBASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 AP000275.1-201ENST00000411943 390 ntBASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 CTSL3P-202ENST00000412179 788 ntBASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 AL117339.3-201ENST00000418733 162 ntBASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 RPL23AP25-201ENST00000430973 463 ntBASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 AC104332.1-201ENST00000440471 797 ntBASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 PIGFP3-201ENST00000441918 722 ntBASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 AC064862.4-201ENST00000442180 334 ntBASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 SCARNA16.4-201ENST00000516956 187 ntBASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 AL139395.1-201ENST00000603662 160 ntBASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 AC010201.1-201ENST00000605051 540 ntBASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 AC004792.1-201ENST00000614523 137 ntBASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 MIR376A1-201ENST00000616574 68 ntBASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 AC109583.2-201ENST00000617367 129 ntBASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 AC132068.1-201ENST00000623805 459 ntBASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHGA11Q9Y5H2 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 Y_RNA.54-201ENST00000362766 105 ntBASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 Y_RNA.65-201ENST00000362846 100 ntBASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 Y_RNA.245-201ENST00000364493 95 ntBASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 SNORD14B-201ENST00000364533 90 ntBASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 Y_RNA.297-201ENST00000364950 91 ntBASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 SNORD115-46-201ENST00000390982 71 ntBASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 SNORA48.4-201ENST00000391089 134 ntBASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 RNA5SP487-201ENST00000410186 122 ntBASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 MTND6P12-201ENST00000428247 522 ntBASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 RPL7AP49-201ENST00000429522 581 ntBASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 MTND3P9-201ENST00000429526 346 ntBASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 AL356867.1-201ENST00000429623 299 ntBASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 AC091286.1-201ENST00000431233 461 ntBASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 AL591438.1-201ENST00000433508 581 ntBASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 RPS20P22-201ENST00000473700 357 ntBASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 RPS23P5-201ENST00000495419 428 ntBASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 AC098976.1-201ENST00000513014 541 ntBASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 RNU7-175P-201ENST00000515915 61 ntBASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 DEFB108E-201ENST00000524692 240 ntBASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 AC104581.2-201ENST00000572227 430 ntBASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 AC130289.1-201ENST00000577321 73 ntBASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 RN7SL290P-201ENST00000578661 300 ntBASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 AC234771.5-201ENST00000600161 514 ntBASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 AC022467.1-201ENST00000614738 749 ntBASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 AL161629.2-201ENST00000615347 275 ntBASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA11Q9Y5H2 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms