Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 NCAPGP1-201ENST00000505112 1814 ntBASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 AC092681.1-201ENST00000297369 291 ntBASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 SNORD113-1-201ENST00000365321 69 ntBASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 AL138785.1-201ENST00000425821 331 ntBASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 AC072052.1-201ENST00000496556 306 ntBASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 RNU6-612P-201ENST00000516909 102 ntBASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 AL121603.1-201ENST00000553815 142 ntBASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 AC002545.1-201ENST00000592511 181 ntBASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 AC010620.2-201ENST00000600135 313 ntBASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 AL713866.2-201ENST00000603579 219 ntBASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 AL139124.1-201ENST00000609123 421 ntBASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 AL360181.4-201ENST00000621752 134 ntBASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 AC006206.1-201ENST00000544842 3387 ntBASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDHB11Q9Y5F2 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 AC104964.3-201ENST00000606115 2860 ntBASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 MIR411-201ENST00000362239 96 ntBASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 RNA5SP234-201ENST00000363916 119 ntBASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 Y_RNA.199-201ENST00000364014 102 ntBASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 SNORD14B-201ENST00000364533 90 ntBASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 SNORA70.6-201ENST00000383934 134 ntBASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 Y_RNA.506-201ENST00000384494 102 ntBASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 RNU1-77P-201ENST00000390868 162 ntBASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 AL645733.1-201ENST00000402250 217 ntBASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 AL080315.1-201ENST00000406055 466 ntBASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 RN7SKP125-201ENST00000410481 302 ntBASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 RPL37P18-201ENST00000411602 243 ntBASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 AL606753.1-201ENST00000427435 87 ntBASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 AL591043.1-201ENST00000432461 424 ntBASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 RPS20P1-201ENST00000434853 354 ntBASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 SERF1AP1-201ENST00000514575 187 ntBASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 SCARNA24.2-201ENST00000516968 130 ntBASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 AL161713.1-201ENST00000555538 145 ntBASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 MIR4643-201ENST00000577473 78 ntBASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 AC068870.2-201ENST00000620635 389 ntBASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
PCDHB11Q9Y5F2 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PCDHB11Q9Y5F2 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PCDHB11Q9Y5F2 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 AL078621.3-201ENST00000623707 2042 ntBASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 RNU6-1159P-201ENST00000362933 107 ntBASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 Y_RNA.405-201ENST00000383979 100 ntBASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 Y_RNA.451-201ENST00000384200 100 ntBASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 Y_RNA.524-201ENST00000384564 100 ntBASIC5.33□□□□□ -1.56
PCDHB11Q9Y5F2 Y_RNA.561-201ENST00000384694 100 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms