Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC005344.1-201ENST00000613391 459 ntBASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 AL591424.2-201ENST00000617023 128 ntBASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 AL596245.1-201ENST00000618994 362 ntBASIC4.59□□□□□ -1.67
CTDP1Q9Y5B0 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
CTDP1Q9Y5B0 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.59□□□□□ -1.68
CTDP1Q9Y5B0 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
CTDP1Q9Y5B0 AC011460.1-201ENST00000636268 1834 ntBASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 AP004289.2-201ENST00000444413 1457 ntBASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 SNORA51.2-201ENST00000364595 132 ntBASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 MIR1302-11-201ENST00000408051 138 ntBASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 MIR1302-9-201ENST00000408365 138 ntBASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 SNORA3.3-201ENST00000408712 125 ntBASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 MIR1302-10-201ENST00000408734 138 ntBASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 ANP32BP2-201ENST00000454525 545 ntBASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 AC091153.1-201ENST00000466297 402 ntBASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 AC021382.1-201ENST00000483523 359 ntBASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 AC021146.1-201ENST00000511202 716 ntBASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 SCARNA24.1-201ENST00000516465 137 ntBASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 IGKV2D-23-201ENST00000518179 286 ntBASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 UBE2L4-201ENST00000587688 464 ntBASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 AC010525.2-201ENST00000590920 195 ntBASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 AC104662.1-201ENST00000604448 511 ntBASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 MIR1302-2-201ENST00000607096 138 ntBASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 AL050343.2-201ENST00000607338 280 ntBASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 FP236240.3-201ENST00000623061 327 ntBASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 AC005858.4-201ENST00000623191 700 ntBASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 AL159972.1-201ENST00000625150 448 ntBASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTDP1Q9Y5B0 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 RPL7P26-201ENST00000333817 754 ntBASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 AC005517.2-201ENST00000424673 553 ntBASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 AL451062.2-201ENST00000427515 271 ntBASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 AL133547.1-201ENST00000448546 220 ntBASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 CACYBPP2-201ENST00000453625 678 ntBASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 AC078785.3-201ENST00000476607 425 ntBASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 SNORA70.14-201ENST00000516205 110 ntBASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 AC105029.1-201ENST00000520250 669 ntBASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 OR5B19P-201ENST00000531766 928 ntBASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 AC092470.1-201ENST00000546187 132 ntBASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 AC011611.1-201ENST00000552179 197 ntBASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 KC877982.1-201ENST00000602313 470 ntBASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 YWHAQP7-201ENST00000603536 658 ntBASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 IGHV3-29-201ENST00000604817 344 ntBASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 LINC02471-203ENST00000641941 4752 ntBASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CTDP1Q9Y5B0 RIOK3P1-201ENST00000418778 1528 ntBASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 RNU6-74P-201ENST00000384235 107 ntBASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 AL122016.1-201ENST00000403365 367 ntBASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 AC009161.1-201ENST00000417306 376 ntBASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 AC093156.1-201ENST00000440382 670 ntBASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 AL451050.1-201ENST00000450126 415 ntBASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 AC034236.1-201ENST00000469891 373 ntBASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 NIPA2P2-201ENST00000496376 1083 ntBASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 AC117522.3-201ENST00000507974 584 ntBASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 AC017037.1-201ENST00000508460 471 ntBASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 TRMT10BP1-201ENST00000519377 943 ntBASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 AC023050.3-201ENST00000541142 333 ntBASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms