Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 AC008958.1-201ENST00000511047 682 ntBASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 AC105417.1-201ENST00000514691 285 ntBASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 Y_RNA.693-201ENST00000516641 110 ntBASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 SNORA67.7-201ENST00000516664 135 ntBASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 AC104383.1-201ENST00000530297 370 ntBASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 HMGB1P33-201ENST00000563485 527 ntBASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 AC107304.1-201ENST00000604229 296 ntBASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 AC008536.2-201ENST00000607284 349 ntBASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 AC012531.5-201ENST00000611375 151 ntBASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 AP001486.3-201ENST00000615334 372 ntBASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 MTND5P42-201ENST00000637720 498 ntBASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 CUL1P1-201ENST00000509510 2425 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 AC007785.2-201ENST00000598627 1916 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 Y_RNA.9-201ENST00000362354 101 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 RNU6-1322P-201ENST00000364309 107 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 RNU6-61P-201ENST00000365528 109 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 RNA5SP283-201ENST00000365604 119 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 RNU6-741P-201ENST00000383889 107 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 AP000567.1-201ENST00000406413 156 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 RNU2-33P-201ENST00000410344 192 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 RN7SKP202-201ENST00000410439 330 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 RNU6-387P-201ENST00000411331 105 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 RPS12P24-201ENST00000412619 387 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 AL356095.1-201ENST00000417217 199 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 USP9YP28-201ENST00000435142 589 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 Z99127.3-201ENST00000448158 395 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 RNU7-182P-201ENST00000459009 62 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 AC034236.1-201ENST00000469891 373 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 RN7SL271P-201ENST00000487601 295 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 RPL39P36-201ENST00000490784 156 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 AL160314.1-201ENST00000490836 438 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 AC108078.2-201ENST00000510750 236 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 AC011352.1-201ENST00000512300 793 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 TTC39CP1-201ENST00000512513 755 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 RNU6-1282P-201ENST00000516735 96 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 RNU6-677P-201ENST00000516914 101 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 GNRHR2P1-201ENST00000555315 631 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 RN7SL600P-201ENST00000581811 299 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 MIR3158-1-201ENST00000583596 81 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 AP001596.2-201ENST00000608410 312 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 AC009570.1-201ENST00000609599 745 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 FAM27D1-201ENST00000612308 341 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 AL390240.1-201ENST00000612950 384 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 AC090517.2-201ENST00000614966 680 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 AC006133.1-201ENST00000617106 264 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 AC025034.2-201ENST00000623264 286 ntBASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LSM4Q9Y4Z0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.24□□□□□ -1.89
LSM4Q9Y4Z0 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LSM4Q9Y4Z0 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
LSM4Q9Y4Z0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LSM4Q9Y4Z0 IPO8P1-201ENST00000455509 3109 ntBASIC3.24□□□□□ -1.89
LSM4Q9Y4Z0 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.24□□□□□ -1.89
LSM4Q9Y4Z0 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.24□□□□□ -1.89
LSM4Q9Y4Z0 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LSM4Q9Y4Z0 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.24□□□□□ -1.89
LSM4Q9Y4Z0 RNU1-14P-201ENST00000362759 152 ntBASIC3.24□□□□□ -1.89
LSM4Q9Y4Z0 RNU6-1167P-201ENST00000363227 94 ntBASIC3.24□□□□□ -1.89
LSM4Q9Y4Z0 RNU6-1158P-201ENST00000391167 107 ntBASIC3.24□□□□□ -1.89
LSM4Q9Y4Z0 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LSM4Q9Y4Z0 CIR1P3-201ENST00000405137 479 ntBASIC3.24□□□□□ -1.89
LSM4Q9Y4Z0 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.24□□□□□ -1.89
LSM4Q9Y4Z0 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms