Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 H3F3AP1-201ENST00000559984 334 ntBASIC2.15□□□□□ -2.07
CHTOPQ9Y3Y2 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.15□□□□□ -2.07
CHTOPQ9Y3Y2 AC106782.4-201ENST00000568264 210 ntBASIC2.15□□□□□ -2.07
CHTOPQ9Y3Y2 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CHTOPQ9Y3Y2 MIR3912-201ENST00000577566 105 ntBASIC2.15□□□□□ -2.07
CHTOPQ9Y3Y2 MIR3922-201ENST00000585192 84 ntBASIC2.15□□□□□ -2.07
CHTOPQ9Y3Y2 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.15□□□□□ -2.07
CHTOPQ9Y3Y2 RPP40P2-201ENST00000603596 712 ntBASIC2.15□□□□□ -2.07
CHTOPQ9Y3Y2 AL160237.3-201ENST00000604114 1013 ntBASIC2.15□□□□□ -2.07
CHTOPQ9Y3Y2 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.15□□□□□ -2.07
CHTOPQ9Y3Y2 AC011939.3-201ENST00000613686 466 ntBASIC2.15□□□□□ -2.07
CHTOPQ9Y3Y2 MIR6875-201ENST00000617506 72 ntBASIC2.15□□□□□ -2.07
CHTOPQ9Y3Y2 ZYXP1-201ENST00000617638 118 ntBASIC2.15□□□□□ -2.07
CHTOPQ9Y3Y2 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
CHTOPQ9Y3Y2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
CHTOPQ9Y3Y2 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 SNORA70.2-201ENST00000364506 135 ntBASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 SNORD17-201ENST00000390930 237 ntBASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 MIR1302-8-201ENST00000408342 128 ntBASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 AC096664.2-201ENST00000411843 406 ntBASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 SKA2P1-201ENST00000425592 390 ntBASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 AL031659.1-201ENST00000447075 539 ntBASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 AC114755.5-201ENST00000447760 831 ntBASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 ELOCP23-201ENST00000452014 332 ntBASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 AC073387.1-201ENST00000453261 709 ntBASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 RPL31P50-201ENST00000471002 296 ntBASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 RN7SL132P-201ENST00000478131 296 ntBASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 AP003497.1-201ENST00000528472 562 ntBASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 AC103843.2-201ENST00000530523 682 ntBASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 AC006199.1-201ENST00000548728 219 ntBASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 AC067959.1-201ENST00000604334 379 ntBASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 AL138963.2-201ENST00000605137 226 ntBASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 AC090912.3-201ENST00000609775 533 ntBASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 AC079416.3-201ENST00000624479 549 ntBASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 U2.21-201ENST00000637295 81 ntBASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
CHTOPQ9Y3Y2 AC008555.8-201ENST00000623602 2168 ntBASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 RNA5SP479-201ENST00000364858 117 ntBASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 MIR676-201ENST00000390702 67 ntBASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 RNU6-952P-201ENST00000391164 108 ntBASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 AC004975.1-201ENST00000428733 208 ntBASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 PTGES3P1-201ENST00000439531 483 ntBASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 HMGN2P10-201ENST00000448085 265 ntBASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 NUTF2P7-201ENST00000453086 375 ntBASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 CECR9-201ENST00000453421 199 ntBASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 RPL18AP17-201ENST00000455326 198 ntBASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 AC103987.1-201ENST00000473394 348 ntBASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 CAB39P1-201ENST00000502277 460 ntBASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 NPM1P41-201ENST00000512920 831 ntBASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 RNA5SP165-201ENST00000517142 115 ntBASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 RGS5-218ENST00000526176 574 ntTSL 4 BASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 DEFB130C-202ENST00000530001 230 ntBASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 MIR4276-201ENST00000584832 70 ntBASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 AC005261.5-201ENST00000596280 355 ntBASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 AL121652.1-201ENST00000608851 448 ntBASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 AL627230.6-201ENST00000611129 280 ntBASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 AC010338.1-201ENST00000621823 717 ntBASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 AL356094.1-201ENST00000624663 1212 ntBASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CHTOPQ9Y3Y2 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CHTOPQ9Y3Y2 RNU4-35P-201ENST00000362588 141 ntBASIC2.12□□□□□ -2.07
CHTOPQ9Y3Y2 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CHTOPQ9Y3Y2 SNORA51.11-201ENST00000384442 131 ntBASIC2.12□□□□□ -2.07
CHTOPQ9Y3Y2 AL512604.1-201ENST00000404812 257 ntBASIC2.12□□□□□ -2.07
CHTOPQ9Y3Y2 RNU6-628P-201ENST00000410675 107 ntBASIC2.12□□□□□ -2.07
CHTOPQ9Y3Y2 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
CHTOPQ9Y3Y2 AL353729.1-201ENST00000425044 720 ntBASIC2.12□□□□□ -2.07
CHTOPQ9Y3Y2 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.12□□□□□ -2.07
CHTOPQ9Y3Y2 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.12□□□□□ -2.07
CHTOPQ9Y3Y2 AC018644.1-201ENST00000429934 551 ntBASIC2.12□□□□□ -2.07
CHTOPQ9Y3Y2 ATP5JP1-201ENST00000431631 322 ntBASIC2.12□□□□□ -2.07
CHTOPQ9Y3Y2 HSPD1P21-201ENST00000436541 245 ntBASIC2.12□□□□□ -2.07
CHTOPQ9Y3Y2 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC2.12□□□□□ -2.07
CHTOPQ9Y3Y2 BTBD7P2-201ENST00000441962 620 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms