Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC021146.1-201ENST00000511202 716 ntBASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 AC017037.2-201ENST00000513850 890 ntBASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 Y_RNA.702-201ENST00000516843 96 ntBASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 AC011979.2-201ENST00000527568 352 ntBASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 AC091135.1-201ENST00000585943 307 ntBASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 AL669831.4-202ENST00000590817 238 ntBASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 AC007687.1-201ENST00000602704 304 ntBASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 AC015967.1-201ENST00000619893 476 ntBASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 U7.8-201ENST00000619968 63 ntBASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 CASC19-280ENST00000642102 1351 ntBASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
SSX2IPQ9Y2D8 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 OR1S2-201ENST00000302592 978 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 RNA5SP387-201ENST00000364226 106 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 RNA5SP72-201ENST00000364442 117 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 MIR34B-201ENST00000385076 84 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 RNU6-876P-201ENST00000391295 104 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 SNRPEP10-201ENST00000420249 274 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 RPL23AP83-201ENST00000434984 473 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 RPL23AP33-201ENST00000442301 452 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 AL590399.6-201ENST00000446396 307 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 AL671855.1-201ENST00000446875 1203 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 AC140076.1-201ENST00000449897 361 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 RNU7-59P-201ENST00000459101 61 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 RN7SL93P-201ENST00000463035 293 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 HMGB1P25-201ENST00000468402 607 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 AC083798.1-201ENST00000472671 131 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 AC078785.3-201ENST00000476607 425 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 SNORA20.3-201ENST00000516880 132 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 IGKV2-38-201ENST00000517443 247 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 AP001646.1-201ENST00000527936 915 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 OR4T1P-201ENST00000554933 911 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 AC098848.2-201ENST00000588023 330 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 AL136363.1-201ENST00000605349 337 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 U3.45-201ENST00000607547 219 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 AC063943.3-201ENST00000615562 356 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 AL591424.2-201ENST00000617023 128 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 U73479.1-201ENST00000618062 168 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 AC006065.5-201ENST00000623427 349 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 FER-210ENST00000628534 558 ntTSL 5 BASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 TNPO1P3-201ENST00000436471 2662 ntBASIC4.09□□□□□ -1.75
SSX2IPQ9Y2D8 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
SSX2IPQ9Y2D8 NCAPGP1-201ENST00000505112 1814 ntBASIC4.09□□□□□ -1.76
SSX2IPQ9Y2D8 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SSX2IPQ9Y2D8 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 Y_RNA.333-201ENST00000365274 102 ntBASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 MT-TL1-201ENST00000386347 75 ntBASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 RPS29P4-201ENST00000414733 161 ntBASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 SYF2P2-201ENST00000417620 583 ntBASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 TPT1P14-201ENST00000448018 505 ntBASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 RPS17P13-201ENST00000448974 407 ntBASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 AL049714.1-201ENST00000466686 347 ntBASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 RPS29P25-201ENST00000481709 171 ntBASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 AC106707.2-201ENST00000484182 374 ntBASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 BTF3L4P4-201ENST00000506381 449 ntBASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 AC110768.1-201ENST00000509222 400 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms