Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 RNA5SP210-201ENST00000391034 120 ntBASIC0.69□□□□□ -2.3
MACF1Q9UPN3 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC0.69□□□□□ -2.3
MACF1Q9UPN3 RPL23AP74-201ENST00000437246 471 ntBASIC0.69□□□□□ -2.3
MACF1Q9UPN3 SNRPFP3-201ENST00000457792 225 ntBASIC0.69□□□□□ -2.3
MACF1Q9UPN3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
MACF1Q9UPN3 RNU6-916P-201ENST00000516088 109 ntBASIC0.69□□□□□ -2.3
MACF1Q9UPN3 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC0.69□□□□□ -2.3
MACF1Q9UPN3 LSM6P2-201ENST00000552208 177 ntBASIC0.69□□□□□ -2.3
MACF1Q9UPN3 MIR4653-201ENST00000585107 83 ntBASIC0.69□□□□□ -2.3
MACF1Q9UPN3 AC120053.1-201ENST00000607706 736 ntBASIC0.69□□□□□ -2.3
MACF1Q9UPN3 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC0.69□□□□□ -2.3
MACF1Q9UPN3 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
MACF1Q9UPN3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.69□□□□□ -2.3
MACF1Q9UPN3 SYT14P1-201ENST00000481459 721 ntBASIC0.69□□□□□ -2.3
MACF1Q9UPN3 HMGB1P47-201ENST00000511281 589 ntBASIC0.69□□□□□ -2.3
MACF1Q9UPN3 HMGB1P41-201ENST00000520234 440 ntBASIC0.69□□□□□ -2.3
MACF1Q9UPN3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC0.69□□□□□ -2.3
MACF1Q9UPN3 AL109653.1-201ENST00000603091 248 ntBASIC0.69□□□□□ -2.3
MACF1Q9UPN3 BNIP3P4-201ENST00000604946 565 ntBASIC0.69□□□□□ -2.3
MACF1Q9UPN3 AP000484.1-201ENST00000620067 1252 ntBASIC0.69□□□□□ -2.3
MACF1Q9UPN3 AL118508.4-201ENST00000624142 1176 ntBASIC0.69□□□□□ -2.3
MACF1Q9UPN3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC0.69□□□□□ -2.3
MACF1Q9UPN3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC0.68□□□□□ -2.3
MACF1Q9UPN3 SNORD114-23-201ENST00000363536 72 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.68□□□□□ -2.3
MACF1Q9UPN3 AC092393.1-201ENST00000439625 742 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 SNORA31.24-201ENST00000517232 57 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
MACF1Q9UPN3 AL356806.1-201ENST00000422524 916 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 PNRC2P1-201ENST00000423940 420 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 CR848007.2-201ENST00000424918 787 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 AC073614.1-201ENST00000438690 650 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 AP000942.1-201ENST00000463969 747 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC0.68□□□□□ -2.3
MACF1Q9UPN3 AC048346.1-201ENST00000510247 144 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 MIR4711-201ENST00000578274 70 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC0.68□□□□□ -2.3
MACF1Q9UPN3 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC0.68□□□□□ -2.3
MACF1Q9UPN3 AC010332.2-201ENST00000613083 1904 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
MACF1Q9UPN3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.68□□□□□ -2.3
MACF1Q9UPN3 RNU4-91P-201ENST00000364778 135 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 AL355615.1-201ENST00000406187 641 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 VN1R96P-201ENST00000446052 858 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 USP9YP10-201ENST00000454868 628 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 AC104997.1-201ENST00000519761 717 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 RNU6-1083P-201ENST00000384022 107 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 SLC9B1P2-201ENST00000398120 1184 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.68□□□□□ -2.3
MACF1Q9UPN3 RNU4-60P-201ENST00000517239 135 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC0.68□□□□□ -2.3
MACF1Q9UPN3 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC0.68□□□□□ -2.3
MACF1Q9UPN3 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC0.68□□□□□ -2.3
MACF1Q9UPN3 AL135786.2-201ENST00000608422 615 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC0.68□□□□□ -2.3
MACF1Q9UPN3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
MACF1Q9UPN3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC0.68□□□□□ -2.3
MACF1Q9UPN3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
MACF1Q9UPN3 Y_RNA.119-201ENST00000363301 96 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 RNU6-884P-201ENST00000363889 107 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 OR2X1P-201ENST00000421144 687 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 AL121877.1-201ENST00000453704 622 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 RPS29P29-201ENST00000456396 171 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 AL031775.1-201ENST00000607014 887 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 AL138478.1-201ENST00000612252 832 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 MIR363-201ENST00000384840 75 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.68□□□□□ -2.3
MACF1Q9UPN3 HMGB1P16-201ENST00000447155 540 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 SNORD124-201ENST00000459577 104 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC0.68□□□□□ -2.3
MACF1Q9UPN3 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
MACF1Q9UPN3 AL356118.1-201ENST00000635272 1078 ntBASIC0.68□□□□□ -2.3
MACF1Q9UPN3 RNU6-418P-201ENST00000384035 107 ntBASIC0.67□□□□□ -2.3
MACF1Q9UPN3 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.67□□□□□ -2.3
MACF1Q9UPN3 MTCO3P17-201ENST00000443775 513 ntBASIC0.67□□□□□ -2.3
MACF1Q9UPN3 AMD1P1-201ENST00000457220 922 ntBASIC0.67□□□□□ -2.3
MACF1Q9UPN3 AC010469.1-201ENST00000463864 576 ntBASIC0.67□□□□□ -2.3
MACF1Q9UPN3 AC021146.9-201ENST00000512503 156 ntBASIC0.67□□□□□ -2.3
MACF1Q9UPN3 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC0.67□□□□□ -2.3
MACF1Q9UPN3 AC244517.3-201ENST00000616254 1235 ntBASIC0.67□□□□□ -2.3
MACF1Q9UPN3 TPTE2P4-201ENST00000258589 1605 ntBASIC0.67□□□□□ -2.3
MACF1Q9UPN3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
MACF1Q9UPN3 AC091812.1-201ENST00000432235 1948 ntBASIC0.67□□□□□ -2.3
MACF1Q9UPN3 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
MACF1Q9UPN3 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC0.67□□□□□ -2.3
MACF1Q9UPN3 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.67□□□□□ -2.3
MACF1Q9UPN3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
MACF1Q9UPN3 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.67□□□□□ -2.3
MACF1Q9UPN3 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.67□□□□□ -2.3
MACF1Q9UPN3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC0.67□□□□□ -2.3
MACF1Q9UPN3 RNA5SP106-201ENST00000517274 100 ntBASIC0.67□□□□□ -2.3
MACF1Q9UPN3 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC0.67□□□□□ -2.3
MACF1Q9UPN3 WDR61-205ENST00000558459 884 ntTSL 3 BASIC0.67□□□□□ -2.3
MACF1Q9UPN3 OR1M4P-201ENST00000589199 287 ntBASIC0.67□□□□□ -2.3
MACF1Q9UPN3 MIR373-201ENST00000362273 69 ntBASIC0.67□□□□□ -2.3
MACF1Q9UPN3 FTH1P15-201ENST00000406984 280 ntBASIC0.67□□□□□ -2.3
MACF1Q9UPN3 AC011037.1-201ENST00000483964 558 ntBASIC0.67□□□□□ -2.3
MACF1Q9UPN3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms