Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCNL1Q9UK58 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.16□□□□□ -1.74
CCNL1Q9UK58 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.16□□□□□ -1.74
CCNL1Q9UK58 AC006338.1-201ENST00000618453 749 ntBASIC4.16□□□□□ -1.74
CCNL1Q9UK58 AC233309.1-201ENST00000619522 751 ntBASIC4.16□□□□□ -1.74
CCNL1Q9UK58 AL008636.1-201ENST00000625038 1018 ntBASIC4.16□□□□□ -1.74
CCNL1Q9UK58 LRRC77P-213ENST00000637727 880 ntBASIC4.16□□□□□ -1.74
CCNL1Q9UK58 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.16□□□□□ -1.74
CCNL1Q9UK58 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCNL1Q9UK58 AC010733.2-201ENST00000589496 5702 ntBASIC4.16□□□□□ -1.74
CCNL1Q9UK58 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.16□□□□□ -1.74
CCNL1Q9UK58 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCNL1Q9UK58 AC138915.3-201ENST00000562908 1389 ntBASIC4.15□□□□□ -1.74
CCNL1Q9UK58 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
CCNL1Q9UK58 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.15□□□□□ -1.74
CCNL1Q9UK58 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.15□□□□□ -1.74
CCNL1Q9UK58 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.15□□□□□ -1.74
CCNL1Q9UK58 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCNL1Q9UK58 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCNL1Q9UK58 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCNL1Q9UK58 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCNL1Q9UK58 FRG1BP-201ENST00000278882 761 ntBASIC4.15□□□□□ -1.75
CCNL1Q9UK58 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCNL1Q9UK58 RNA5SP258-201ENST00000362750 119 ntBASIC4.15□□□□□ -1.75
CCNL1Q9UK58 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.15□□□□□ -1.75
CCNL1Q9UK58 AC019097.1-201ENST00000424783 735 ntBASIC4.15□□□□□ -1.75
CCNL1Q9UK58 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.15□□□□□ -1.75
CCNL1Q9UK58 AC133104.1-201ENST00000429100 218 ntBASIC4.15□□□□□ -1.75
CCNL1Q9UK58 AL357552.1-201ENST00000445254 415 ntBASIC4.15□□□□□ -1.75
CCNL1Q9UK58 BX276092.4-201ENST00000452056 248 ntBASIC4.15□□□□□ -1.75
CCNL1Q9UK58 RPS20P32-201ENST00000456044 356 ntBASIC4.15□□□□□ -1.75
CCNL1Q9UK58 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.15□□□□□ -1.75
CCNL1Q9UK58 AC022795.1-201ENST00000473808 480 ntBASIC4.15□□□□□ -1.75
CCNL1Q9UK58 AC055855.1-201ENST00000489563 579 ntBASIC4.15□□□□□ -1.75
CCNL1Q9UK58 HMGB1P19-201ENST00000517578 577 ntBASIC4.15□□□□□ -1.75
CCNL1Q9UK58 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.15□□□□□ -1.75
CCNL1Q9UK58 AL356432.3-201ENST00000568952 465 ntBASIC4.15□□□□□ -1.75
CCNL1Q9UK58 MIR2682-201ENST00000580305 110 ntBASIC4.15□□□□□ -1.75
CCNL1Q9UK58 MIR3162-201ENST00000581818 82 ntBASIC4.15□□□□□ -1.75
CCNL1Q9UK58 AC104984.5-201ENST00000586878 94 ntBASIC4.15□□□□□ -1.75
CCNL1Q9UK58 AC067852.4-201ENST00000590314 478 ntBASIC4.15□□□□□ -1.75
CCNL1Q9UK58 AC008277.2-201ENST00000605196 797 ntBASIC4.15□□□□□ -1.75
CCNL1Q9UK58 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.15□□□□□ -1.75
CCNL1Q9UK58 AL590282.1-201ENST00000610379 1136 ntBASIC4.15□□□□□ -1.75
CCNL1Q9UK58 MIR6715A-201ENST00000615929 79 ntBASIC4.15□□□□□ -1.75
CCNL1Q9UK58 AC010149.2-201ENST00000637608 315 ntBASIC4.15□□□□□ -1.75
CCNL1Q9UK58 AC006504.1-201ENST00000562493 3666 ntBASIC4.15□□□□□ -1.75
CCNL1Q9UK58 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCNL1Q9UK58 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCNL1Q9UK58 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCNL1Q9UK58 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.15□□□□□ -1.75
CCNL1Q9UK58 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.14□□□□□ -1.75
CCNL1Q9UK58 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCNL1Q9UK58 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCNL1Q9UK58 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CCNL1Q9UK58 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCNL1Q9UK58 RNU6-534P-201ENST00000364877 106 ntBASIC4.14□□□□□ -1.75
CCNL1Q9UK58 RNU6-169P-201ENST00000365336 107 ntBASIC4.14□□□□□ -1.75
CCNL1Q9UK58 RHOT1P2-201ENST00000366423 333 ntBASIC4.14□□□□□ -1.75
CCNL1Q9UK58 Y_RNA.402-201ENST00000383972 102 ntBASIC4.14□□□□□ -1.75
CCNL1Q9UK58 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCNL1Q9UK58 AMD1P2-201ENST00000412936 992 ntBASIC4.14□□□□□ -1.75
CCNL1Q9UK58 ARPC3P1-201ENST00000437218 533 ntBASIC4.14□□□□□ -1.75
CCNL1Q9UK58 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.14□□□□□ -1.75
CCNL1Q9UK58 RPS15AP9-201ENST00000439856 381 ntBASIC4.14□□□□□ -1.75
CCNL1Q9UK58 HMGB1P15-201ENST00000453854 435 ntBASIC4.14□□□□□ -1.75
CCNL1Q9UK58 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.14□□□□□ -1.75
CCNL1Q9UK58 MTND1P12-201ENST00000455231 147 ntBASIC4.14□□□□□ -1.75
CCNL1Q9UK58 AP1S2P1-201ENST00000457344 379 ntBASIC4.14□□□□□ -1.75
CCNL1Q9UK58 RPL31P58-201ENST00000469001 379 ntBASIC4.14□□□□□ -1.75
CCNL1Q9UK58 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.14□□□□□ -1.75
CCNL1Q9UK58 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.14□□□□□ -1.75
CCNL1Q9UK58 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.14□□□□□ -1.75
CCNL1Q9UK58 AC010486.1-201ENST00000511793 424 ntBASIC4.14□□□□□ -1.75
CCNL1Q9UK58 AC091826.1-201ENST00000514065 313 ntBASIC4.14□□□□□ -1.75
CCNL1Q9UK58 Y_RNA.693-201ENST00000516641 110 ntBASIC4.14□□□□□ -1.75
CCNL1Q9UK58 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.14□□□□□ -1.75
CCNL1Q9UK58 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.14□□□□□ -1.75
CCNL1Q9UK58 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCNL1Q9UK58 AL121579.1-201ENST00000555129 305 ntBASIC4.14□□□□□ -1.75
CCNL1Q9UK58 GTF3AP2-201ENST00000557014 266 ntBASIC4.14□□□□□ -1.75
CCNL1Q9UK58 AL845331.3-202ENST00000562856 261 ntBASIC4.14□□□□□ -1.75
CCNL1Q9UK58 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCNL1Q9UK58 AL357078.3-201ENST00000607528 618 ntBASIC4.14□□□□□ -1.75
CCNL1Q9UK58 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCNL1Q9UK58 MIR1321-201ENST00000637766 79 ntBASIC4.14□□□□□ -1.75
CCNL1Q9UK58 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.14□□□□□ -1.75
CCNL1Q9UK58 AL596275.2-204ENST00000641628 552 ntBASIC4.14□□□□□ -1.75
CCNL1Q9UK58 AL596275.2-206ENST00000641957 626 ntBASIC4.14□□□□□ -1.75
CCNL1Q9UK58 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CCNL1Q9UK58 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CCNL1Q9UK58 AC093908.1-201ENST00000623125 8092 ntBASIC4.14□□□□□ -1.75
CCNL1Q9UK58 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCNL1Q9UK58 MAPK10-253ENST00000641010 4072 ntBASIC4.14□□□□□ -1.75
CCNL1Q9UK58 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCNL1Q9UK58 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCNL1Q9UK58 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCNL1Q9UK58 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
CCNL1Q9UK58 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
CCNL1Q9UK58 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms