Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 WASF1P1-201ENST00000447560 1131 ntBASIC2.34□□□□□ -2.03
DUX4Q9UBX2 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.34□□□□□ -2.03
DUX4Q9UBX2 BX322784.1-201ENST00000455793 1077 ntBASIC2.34□□□□□ -2.03
DUX4Q9UBX2 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.34□□□□□ -2.03
DUX4Q9UBX2 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.34□□□□□ -2.03
DUX4Q9UBX2 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.34□□□□□ -2.03
DUX4Q9UBX2 AC113155.1-201ENST00000511141 769 ntBASIC2.34□□□□□ -2.03
DUX4Q9UBX2 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.34□□□□□ -2.03
DUX4Q9UBX2 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.34□□□□□ -2.03
DUX4Q9UBX2 AL133271.1-201ENST00000538229 291 ntBASIC2.34□□□□□ -2.03
DUX4Q9UBX2 HPRT1P3-201ENST00000539521 576 ntBASIC2.34□□□□□ -2.03
DUX4Q9UBX2 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.34□□□□□ -2.03
DUX4Q9UBX2 AC090888.1-201ENST00000561335 1141 ntBASIC2.34□□□□□ -2.03
DUX4Q9UBX2 AC010546.1-201ENST00000569391 485 ntBASIC2.34□□□□□ -2.03
DUX4Q9UBX2 DNAJC19P3-201ENST00000594491 331 ntBASIC2.34□□□□□ -2.03
DUX4Q9UBX2 VN1R90P-201ENST00000595717 726 ntBASIC2.34□□□□□ -2.03
DUX4Q9UBX2 AL035413.2-201ENST00000604801 525 ntBASIC2.34□□□□□ -2.03
DUX4Q9UBX2 AC005014.3-201ENST00000605985 190 ntBASIC2.34□□□□□ -2.03
DUX4Q9UBX2 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.34□□□□□ -2.03
DUX4Q9UBX2 AC093838.1-201ENST00000613014 469 ntBASIC2.34□□□□□ -2.03
DUX4Q9UBX2 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.34□□□□□ -2.03
DUX4Q9UBX2 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.34□□□□□ -2.03
DUX4Q9UBX2 AC103798.2-201ENST00000624292 632 ntBASIC2.34□□□□□ -2.03
DUX4Q9UBX2 LINC02211-204ENST00000642024 1070 ntBASIC2.34□□□□□ -2.03
DUX4Q9UBX2 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
DUX4Q9UBX2 AC092447.10-201ENST00000620607 1652 ntBASIC2.34□□□□□ -2.04
DUX4Q9UBX2 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
DUX4Q9UBX2 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.34□□□□□ -2.04
DUX4Q9UBX2 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
DUX4Q9UBX2 AC096644.4-201ENST00000563417 2912 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.33□□□□□ -2.04
DUX4Q9UBX2 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
DUX4Q9UBX2 RNU1-112P-201ENST00000364401 164 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 RNU6-1078P-201ENST00000364522 103 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
DUX4Q9UBX2 RNU6-637P-201ENST00000384050 107 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 RNU6-301P-201ENST00000384277 107 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 MIR627-201ENST00000384979 97 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 RNU6-1000P-201ENST00000391066 106 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 RNA5SP354-201ENST00000391247 136 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
DUX4Q9UBX2 RNU2-25P-201ENST00000411041 191 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 MTND1P21-201ENST00000412991 285 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.33□□□□□ -2.04
DUX4Q9UBX2 AC098614.2-201ENST00000426040 255 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.33□□□□□ -2.04
DUX4Q9UBX2 OR4K11P-201ENST00000431829 904 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.33□□□□□ -2.04
DUX4Q9UBX2 FGF7P5-201ENST00000441829 291 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 RPL23AP76-201ENST00000441860 458 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 AC002381.1-201ENST00000447049 280 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.33□□□□□ -2.04
DUX4Q9UBX2 MTND4LP3-201ENST00000468320 276 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 RPS20P22-201ENST00000473700 357 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.33□□□□□ -2.04
DUX4Q9UBX2 AC104563.1-201ENST00000476147 376 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 AC021382.1-201ENST00000483523 359 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 LARP1BP2-201ENST00000486594 519 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.33□□□□□ -2.04
DUX4Q9UBX2 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.33□□□□□ -2.04
DUX4Q9UBX2 OR5BM1P-201ENST00000512021 366 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 AC008837.2-201ENST00000513076 418 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 AC118465.1-201ENST00000513820 1271 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.33□□□□□ -2.04
DUX4Q9UBX2 RNY4P37-201ENST00000516225 96 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.33□□□□□ -2.04
DUX4Q9UBX2 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
DUX4Q9UBX2 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
DUX4Q9UBX2 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.33□□□□□ -2.04
DUX4Q9UBX2 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
DUX4Q9UBX2 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.33□□□□□ -2.04
DUX4Q9UBX2 CYCSP2-201ENST00000558168 301 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 OR4K7P-201ENST00000580232 945 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.33□□□□□ -2.04
DUX4Q9UBX2 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.33□□□□□ -2.04
DUX4Q9UBX2 BBIP1P1-201ENST00000602999 279 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 AC021749.1-201ENST00000604322 607 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 AC107294.1-201ENST00000609524 467 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 AC009268.2-201ENST00000621925 457 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 AC231657.1-201ENST00000624313 397 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.33□□□□□ -2.04
DUX4Q9UBX2 FO624990.1-201ENST00000636373 85 ntBASIC2.33□□□□□ -2.04
DUX4Q9UBX2 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
DUX4Q9UBX2 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.33□□□□□ -2.04
DUX4Q9UBX2 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
DUX4Q9UBX2 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.33□□□□□ -2.04
DUX4Q9UBX2 DDX10P1-201ENST00000448545 1933 ntBASIC2.32□□□□□ -2.04
DUX4Q9UBX2 AL672167.1-206ENST00000356293 943 ntBASIC2.32□□□□□ -2.04
DUX4Q9UBX2 RNU5E-10P-201ENST00000363506 118 ntBASIC2.32□□□□□ -2.04
DUX4Q9UBX2 RNU6-851P-201ENST00000384565 107 ntBASIC2.32□□□□□ -2.04
DUX4Q9UBX2 SNORA80E-201ENST00000384744 137 ntBASIC2.32□□□□□ -2.04
DUX4Q9UBX2 RNU6-754P-201ENST00000391166 107 ntBASIC2.32□□□□□ -2.04
DUX4Q9UBX2 RNU2-33P-201ENST00000410344 192 ntBASIC2.32□□□□□ -2.04
DUX4Q9UBX2 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.32□□□□□ -2.04
DUX4Q9UBX2 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.32□□□□□ -2.04
DUX4Q9UBX2 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.32□□□□□ -2.04
DUX4Q9UBX2 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.32□□□□□ -2.04
DUX4Q9UBX2 RPS15AP7-201ENST00000439294 405 ntBASIC2.32□□□□□ -2.04
DUX4Q9UBX2 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.32□□□□□ -2.04
DUX4Q9UBX2 AL049734.2-201ENST00000441066 616 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms