Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC025031.4-201ENST00000621248 3271 ntBASIC4.54□□□□□ -1.68
PPARGC1AQ9UBK2 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.54□□□□□ -1.68
PPARGC1AQ9UBK2 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.54□□□□□ -1.68
PPARGC1AQ9UBK2 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.54□□□□□ -1.68
PPARGC1AQ9UBK2 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
PPARGC1AQ9UBK2 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 MIR448-201ENST00000362131 111 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 SNORA23-201ENST00000365128 182 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 SNORA4.3-201ENST00000365564 137 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 RNU6-43P-201ENST00000384302 107 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 RNU6-1127P-201ENST00000384580 107 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 RN7SKP158-201ENST00000410453 326 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 FAR2P2-201ENST00000413041 594 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 AC074085.1-201ENST00000413598 418 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 RPS23P10-201ENST00000416185 486 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 AL139396.1-201ENST00000421137 167 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 PPP1R11P2-201ENST00000423543 382 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 FAR2P4-202ENST00000425399 584 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 CYCSP43-201ENST00000438233 310 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 AC004866.2-201ENST00000438285 481 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 H2AFZP6-201ENST00000444403 394 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 RPL23AP24-201ENST00000458203 385 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 SCARNA18-201ENST00000459004 134 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 RN7SL98P-201ENST00000462271 300 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 MTND4P17-201ENST00000470444 350 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 RNU6-1038P-201ENST00000516516 104 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 AP000763.2-201ENST00000540641 163 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 AC092747.3-201ENST00000603769 301 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 AC113403.1-201ENST00000604910 193 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 AC015813.4-201ENST00000610469 179 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 AL450472.3-201ENST00000615578 367 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 AL589994.2-201ENST00000621124 579 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 AL445363.3-201ENST00000623080 671 ntBASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.53□□□□□ -1.68
PPARGC1AQ9UBK2 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 RNA5SP22-201ENST00000365393 109 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 Y_RNA.399-201ENST00000383955 105 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 Y_RNA.422-201ENST00000384054 114 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 UBE2V1P2-201ENST00000397758 440 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 MTCYBP4-201ENST00000401524 249 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 NDUFS5P1-201ENST00000405668 289 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 AL160275.2-201ENST00000412010 394 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 RPS20P14-201ENST00000412545 360 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 RPS3AP52-201ENST00000435639 297 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 AC069285.2-201ENST00000440210 275 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 BRK1P2-201ENST00000442875 223 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 PHBP16-201ENST00000446318 950 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 AC020550.1-201ENST00000447385 163 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 RPS15AP27-201ENST00000449183 343 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 AC116533.1-201ENST00000459748 321 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 VN1R17P-201ENST00000472048 1090 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 MTND5P5-201ENST00000503764 376 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 HMGB3P15-201ENST00000507326 574 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 HIGD1AP13-201ENST00000509878 289 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 RNU6-1045P-201ENST00000516321 107 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 Y_RNA.682-201ENST00000516457 100 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 RNU6-566P-201ENST00000516790 107 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 RNU6-352P-201ENST00000516908 107 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 Y_RNA.718-201ENST00000517110 102 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 IGLVIV-65-201ENST00000517313 360 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 MIR4284-201ENST00000578924 81 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 MIR3941-201ENST00000582572 103 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 CYP2C61P-201ENST00000604072 290 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms