Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.41□□□□□ -1.7
TLR9Q9NR96 AL158196.1-201ENST00000616786 434 ntBASIC4.41□□□□□ -1.7
TLR9Q9NR96 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.41□□□□□ -1.7
TLR9Q9NR96 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
TLR9Q9NR96 AC009093.8-201ENST00000641769 292 ntBASIC4.41□□□□□ -1.7
TLR9Q9NR96 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
TLR9Q9NR96 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TLR9Q9NR96 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TLR9Q9NR96 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.41□□□□□ -1.7
TLR9Q9NR96 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.41□□□□□ -1.7
TLR9Q9NR96 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TLR9Q9NR96 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.41□□□□□ -1.7
TLR9Q9NR96 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
TLR9Q9NR96 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
TLR9Q9NR96 ZNF33CP-201ENST00000432492 2030 ntBASIC4.4□□□□□ -1.7
TLR9Q9NR96 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
TLR9Q9NR96 HSPE1P11-201ENST00000339579 310 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 MIR369-201ENST00000362155 70 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 RNU6-989P-201ENST00000362756 107 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 RNU6-511P-201ENST00000363496 107 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 Y_RNA.144-201ENST00000363521 113 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 RNU4-48P-201ENST00000365559 182 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 MIR558-201ENST00000384920 94 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 RNU6-821P-201ENST00000390995 107 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 AL121834.1-202ENST00000404494 277 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 RNU6-193P-201ENST00000410977 107 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 HSPE1P1-201ENST00000421494 318 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 AC091286.1-201ENST00000431233 461 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.4□□□□□ -1.71
TLR9Q9NR96 ERLEC1P1-201ENST00000433806 578 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.4□□□□□ -1.71
TLR9Q9NR96 AC007547.1-201ENST00000462177 490 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 HMGB1P25-201ENST00000468402 607 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 ST13P14-201ENST00000474095 734 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.4□□□□□ -1.71
TLR9Q9NR96 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.4□□□□□ -1.71
TLR9Q9NR96 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.4□□□□□ -1.71
TLR9Q9NR96 KLHL2P1-201ENST00000508691 521 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 RNU6-1170P-201ENST00000515974 106 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 Y_RNA.665-201ENST00000516177 98 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 RN7SKP256-201ENST00000517201 314 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 NARSP2-201ENST00000518524 679 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 AC068446.3-201ENST00000555285 382 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 AL133153.1-201ENST00000557756 303 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.4□□□□□ -1.71
TLR9Q9NR96 AP001029.3-201ENST00000588063 596 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 AC079684.1-201ENST00000621405 437 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 AC027287.1-201ENST00000553115 1453 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.4□□□□□ -1.71
TLR9Q9NR96 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.4□□□□□ -1.71
TLR9Q9NR96 MAPK10-303ENST00000641324 3959 ntBASIC4.4□□□□□ -1.71
TLR9Q9NR96 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.4□□□□□ -1.71
TLR9Q9NR96 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.39□□□□□ -1.71
TLR9Q9NR96 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TLR9Q9NR96 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.39□□□□□ -1.71
TLR9Q9NR96 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.39□□□□□ -1.71
TLR9Q9NR96 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.39□□□□□ -1.71
TLR9Q9NR96 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.39□□□□□ -1.71
TLR9Q9NR96 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TLR9Q9NR96 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TLR9Q9NR96 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.39□□□□□ -1.71
TLR9Q9NR96 RNU1-108P-201ENST00000362556 161 ntBASIC4.39□□□□□ -1.71
TLR9Q9NR96 RNU6-1078P-201ENST00000364522 103 ntBASIC4.39□□□□□ -1.71
TLR9Q9NR96 Y_RNA.422-201ENST00000384054 114 ntBASIC4.39□□□□□ -1.71
TLR9Q9NR96 Y_RNA.493-201ENST00000384422 102 ntBASIC4.39□□□□□ -1.71
TLR9Q9NR96 SNORD116-29-201ENST00000384516 83 ntBASIC4.39□□□□□ -1.71
TLR9Q9NR96 SNORD66.1-201ENST00000391230 76 ntBASIC4.39□□□□□ -1.71
TLR9Q9NR96 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TLR9Q9NR96 MIR1250-201ENST00000408098 113 ntBASIC4.39□□□□□ -1.71
TLR9Q9NR96 RNA5SP56-201ENST00000410277 118 ntBASIC4.39□□□□□ -1.71
TLR9Q9NR96 VDAC1P9-201ENST00000412766 841 ntBASIC4.39□□□□□ -1.71
TLR9Q9NR96 AL451054.2-201ENST00000420896 202 ntBASIC4.39□□□□□ -1.71
TLR9Q9NR96 EIF4EP1-201ENST00000422311 642 ntBASIC4.39□□□□□ -1.71
TLR9Q9NR96 MED13P1-201ENST00000428342 171 ntBASIC4.39□□□□□ -1.71
TLR9Q9NR96 OR4K11P-201ENST00000431829 904 ntBASIC4.39□□□□□ -1.71
TLR9Q9NR96 NOTCH2P1-201ENST00000443481 624 ntBASIC4.39□□□□□ -1.71
TLR9Q9NR96 Y_RNA.631-201ENST00000459607 101 ntBASIC4.39□□□□□ -1.71
TLR9Q9NR96 AC006512.1-201ENST00000468816 291 ntBASIC4.39□□□□□ -1.71
TLR9Q9NR96 AC108022.1-201ENST00000493466 478 ntBASIC4.39□□□□□ -1.71
TLR9Q9NR96 AC114797.1-201ENST00000514003 728 ntBASIC4.39□□□□□ -1.71
TLR9Q9NR96 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.39□□□□□ -1.71
TLR9Q9NR96 RNU4-29P-201ENST00000515943 174 ntBASIC4.39□□□□□ -1.71
TLR9Q9NR96 Y_RNA.711-201ENST00000516993 102 ntBASIC4.39□□□□□ -1.71
TLR9Q9NR96 FRG2DP-202ENST00000566967 323 ntBASIC4.39□□□□□ -1.71
TLR9Q9NR96 AC106782.4-201ENST00000568264 210 ntBASIC4.39□□□□□ -1.71
TLR9Q9NR96 OR4K8P-201ENST00000578842 1048 ntBASIC4.39□□□□□ -1.71
TLR9Q9NR96 POLR3GP2-201ENST00000588366 668 ntBASIC4.39□□□□□ -1.71
TLR9Q9NR96 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TLR9Q9NR96 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.39□□□□□ -1.71
TLR9Q9NR96 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.39□□□□□ -1.71
TLR9Q9NR96 AC055839.1-201ENST00000634467 498 ntBASIC4.39□□□□□ -1.71
TLR9Q9NR96 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.39□□□□□ -1.71
TLR9Q9NR96 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.39□□□□□ -1.71
TLR9Q9NR96 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TLR9Q9NR96 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.39□□□□□ -1.71
TLR9Q9NR96 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TLR9Q9NR96 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.38□□□□□ -1.71
TLR9Q9NR96 MAPK10-253ENST00000641010 4072 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms