Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 Y_RNA.594-201ENST00000410373 140 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 RNU4-6P-201ENST00000410804 122 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 AL590632.1-201ENST00000424289 371 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 AL669831.1-202ENST00000428504 417 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 AC096644.2-201ENST00000429278 159 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 AC236972.1-201ENST00000433225 199 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 AL731563.1-201ENST00000442202 214 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 DHFRP3-201ENST00000455595 559 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 AC117503.1-201ENST00000472241 394 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 AC017037.1-201ENST00000508460 471 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 RN7SKP60-201ENST00000516985 239 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 RNU6-794P-201ENST00000517261 64 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 AP002404.1-201ENST00000532005 451 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 AL355598.1-201ENST00000604169 202 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 AL450472.3-201ENST00000615578 367 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 SNX18P1Y-201ENST00000616231 511 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 AC009643.2-201ENST00000603543 1448 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 AC011755.1-201ENST00000623763 2049 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 RNU6-1318P-201ENST00000365389 103 ntBASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 RNU6-214P-201ENST00000384130 107 ntBASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 MIR554-201ENST00000384874 96 ntBASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 RPL21P67-201ENST00000402896 478 ntBASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 RPS4XP7-201ENST00000406274 780 ntBASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 RPL21P103-201ENST00000479921 488 ntBASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 AC021146.3-201ENST00000511911 260 ntBASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 RNU6-470P-201ENST00000515954 104 ntBASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 AL161670.1-201ENST00000554348 137 ntBASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 AC012669.1-201ENST00000603209 283 ntBASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 U73479.1-201ENST00000618062 168 ntBASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 AL732372.2-225ENST00000642124 456 ntBASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 DDX18P3-201ENST00000404856 2007 ntBASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 FAM91A3P-201ENST00000456826 2544 ntBASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.29□□□□□ -1.56
ZFYVE28Q9HCC9 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ZFYVE28Q9HCC9 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.28□□□□□ -1.56
ZFYVE28Q9HCC9 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ZFYVE28Q9HCC9 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
ZFYVE28Q9HCC9 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ZFYVE28Q9HCC9 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ZFYVE28Q9HCC9 SNORD62.1-201ENST00000362541 86 ntBASIC5.28□□□□□ -1.56
ZFYVE28Q9HCC9 RNU6-1155P-201ENST00000363554 107 ntBASIC5.28□□□□□ -1.56
ZFYVE28Q9HCC9 RNU6-702P-201ENST00000364982 107 ntBASIC5.28□□□□□ -1.56
ZFYVE28Q9HCC9 RNU6-505P-201ENST00000384427 107 ntBASIC5.28□□□□□ -1.56
ZFYVE28Q9HCC9 SNORA70E-201ENST00000384492 135 ntBASIC5.28□□□□□ -1.56
ZFYVE28Q9HCC9 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
ZFYVE28Q9HCC9 RPL7P37-201ENST00000425095 738 ntBASIC5.28□□□□□ -1.56
ZFYVE28Q9HCC9 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.28□□□□□ -1.56
ZFYVE28Q9HCC9 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.28□□□□□ -1.56
ZFYVE28Q9HCC9 MRPS18BP2-201ENST00000434310 759 ntBASIC5.28□□□□□ -1.56
ZFYVE28Q9HCC9 RNU6-953P-201ENST00000459154 107 ntBASIC5.28□□□□□ -1.56
ZFYVE28Q9HCC9 AC128713.1-201ENST00000471495 306 ntBASIC5.28□□□□□ -1.56
ZFYVE28Q9HCC9 RN7SL132P-201ENST00000478131 296 ntBASIC5.28□□□□□ -1.56
ZFYVE28Q9HCC9 AC096745.1-201ENST00000509945 370 ntBASIC5.28□□□□□ -1.56
ZFYVE28Q9HCC9 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.28□□□□□ -1.56
ZFYVE28Q9HCC9 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.28□□□□□ -1.56
ZFYVE28Q9HCC9 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.28□□□□□ -1.56
ZFYVE28Q9HCC9 OR4H12P-201ENST00000556269 907 ntBASIC5.28□□□□□ -1.56
ZFYVE28Q9HCC9 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC5.28□□□□□ -1.56
ZFYVE28Q9HCC9 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.28□□□□□ -1.56
ZFYVE28Q9HCC9 AC073539.2-201ENST00000597113 165 ntBASIC5.28□□□□□ -1.56
ZFYVE28Q9HCC9 AC010680.4-201ENST00000605334 543 ntBASIC5.28□□□□□ -1.56
ZFYVE28Q9HCC9 ADAM5-202ENST00000399789 1942 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms