Protein–RNA interactions for Protein: Q9H9D4

ZNF408, Zinc finger protein 408, humanhuman

Predictions only

Length 720 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408Q9H9D4 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ZNF408Q9H9D4 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
ZNF408Q9H9D4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
ZNF408Q9H9D4 PRO1804-201ENST00000623780 2050 ntBASIC4.9□□□□□ -1.62
ZNF408Q9H9D4 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
ZNF408Q9H9D4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
ZNF408Q9H9D4 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
ZNF408Q9H9D4 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 RNU6-694P-201ENST00000364071 147 ntBASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 RNA5SP22-201ENST00000365393 109 ntBASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 RNU6-190P-201ENST00000384154 102 ntBASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 SNORA36C-201ENST00000384289 132 ntBASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 RNU6-817P-201ENST00000391083 104 ntBASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 HSPD1P16-201ENST00000402302 394 ntBASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 RPL30P2-201ENST00000414021 291 ntBASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 RPL21P91-201ENST00000429231 479 ntBASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 HMGB1P27-201ENST00000431429 603 ntBASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 HMGN2P21-201ENST00000447764 270 ntBASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 HSPE1P6-201ENST00000479457 291 ntBASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 AC108860.1-201ENST00000484521 383 ntBASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 RN7SL323P-201ENST00000494712 295 ntBASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 Vault.1-201ENST00000516474 102 ntBASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 RNU6-685P-201ENST00000517088 95 ntBASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 RNU6-1314P-201ENST00000517139 104 ntBASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 IGKV2D-19-201ENST00000523346 262 ntBASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 AC109635.4-202ENST00000531666 412 ntBASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 AC010928.3-201ENST00000587712 541 ntBASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 AC067852.3-201ENST00000589177 561 ntBASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 AL138889.2-201ENST00000603883 242 ntBASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 AL442067.2-201ENST00000614033 363 ntBASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 AC009248.2-201ENST00000619826 254 ntBASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
ZNF408Q9H9D4 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 AL672167.1-204ENST00000641875 3017 ntBASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 DEFB108F-201ENST00000344638 222 ntBASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 RNA5SP72-201ENST00000364442 117 ntBASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 SNORA7.2-201ENST00000364446 145 ntBASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 SNORA32.2-201ENST00000384049 122 ntBASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 PTMAP5-201ENST00000393073 333 ntBASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 RPS29P4-201ENST00000414733 161 ntBASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 NCOR1P3-201ENST00000420479 303 ntBASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 AC079780.1-201ENST00000428259 207 ntBASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 RPL21P112-201ENST00000434403 463 ntBASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 KCTD9P3-201ENST00000434597 1169 ntBASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 HMGB1P22-201ENST00000505315 124 ntBASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 PSMA3P-201ENST00000555485 635 ntBASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 AC008521.1-201ENST00000587471 187 ntBASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 AC087045.1-201ENST00000605856 382 ntBASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 uc_338.5-201ENST00000611839 155 ntBASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 MIR7151-201ENST00000617477 60 ntBASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 AL359697.1-201ENST00000624879 587 ntBASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
ZNF408Q9H9D4 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.88□□□□□ -1.63
ZNF408Q9H9D4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.88□□□□□ -1.63
ZNF408Q9H9D4 AP001350.1-201ENST00000601906 1524 ntBASIC4.88□□□□□ -1.63
ZNF408Q9H9D4 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.88□□□□□ -1.63
ZNF408Q9H9D4 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
ZNF408Q9H9D4 Y_RNA.356-201ENST00000365475 113 ntBASIC4.88□□□□□ -1.63
ZNF408Q9H9D4 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
ZNF408Q9H9D4 U8.11-201ENST00000384699 133 ntBASIC4.88□□□□□ -1.63
ZNF408Q9H9D4 U8.12-201ENST00000384701 133 ntBASIC4.88□□□□□ -1.63
ZNF408Q9H9D4 RNU6-550P-201ENST00000391057 101 ntBASIC4.88□□□□□ -1.63
ZNF408Q9H9D4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.88□□□□□ -1.63
ZNF408Q9H9D4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.88□□□□□ -1.63
ZNF408Q9H9D4 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms