Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 DNAJC19P4-201ENST00000440115 345 ntBASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 AC079448.1-201ENST00000449377 373 ntBASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 AC025518.1-201ENST00000479856 347 ntBASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 RN7SL432P-201ENST00000484057 298 ntBASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 AC093663.1-201ENST00000497190 394 ntBASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 AC114797.1-201ENST00000514003 728 ntBASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 RNU6-390P-201ENST00000516259 103 ntBASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 RNU1-103P-201ENST00000516502 125 ntBASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 RN7SKP244-201ENST00000516513 307 ntBASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 RNU6-410P-201ENST00000517006 107 ntBASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 SUMO2P20-201ENST00000520803 283 ntBASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 AC022616.3-201ENST00000523940 148 ntBASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 FAM60DP-201ENST00000524174 632 ntBASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 AP003033.1-201ENST00000527244 415 ntBASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 ZNF519P2-201ENST00000557032 169 ntBASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 AC055876.1-202ENST00000567053 138 ntBASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 AC005858.4-201ENST00000623191 700 ntBASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 AC110801.1-201ENST00000623590 212 ntBASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 AC027290.2-201ENST00000623210 18662 ntBASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RTFDC1Q9BY42 EXOC5P1-201ENST00000510543 1969 ntBASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 AL035425.3-201ENST00000564206 4996 ntBASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 RNU6-511P-201ENST00000363496 107 ntBASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 RNU6-108P-201ENST00000365558 107 ntBASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 AL359634.1-202ENST00000404721 284 ntBASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 AMD1P2-201ENST00000412936 992 ntBASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 DPPA2P1-201ENST00000428060 556 ntBASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 GPR143P-201ENST00000434155 205 ntBASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 RPL36AP6-201ENST00000435770 321 ntBASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 MTND2P24-201ENST00000453434 806 ntBASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 AC007182.2-201ENST00000489251 402 ntBASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 AC079382.1-201ENST00000493346 557 ntBASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 RNA5SP309-201ENST00000516670 106 ntBASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 AL355836.1-201ENST00000555951 870 ntBASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 MIR4293-201ENST00000584305 78 ntBASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 AP000860.1-201ENST00000605250 559 ntBASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 AC010133.1-201ENST00000615809 842 ntBASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 AC068880.5-201ENST00000624331 290 ntBASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 AL136313.1-201ENST00000624804 202 ntBASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.38□□□□□ -1.71
RTFDC1Q9BY42 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 AC073343.1-201ENST00000328239 651 ntBASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 Y_RNA.3-201ENST00000362331 103 ntBASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 RNU6-1103P-201ENST00000384150 107 ntBASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 RN7SKP111-201ENST00000410349 271 ntBASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 AL031779.1-201ENST00000415663 330 ntBASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 AL358934.1-201ENST00000432346 324 ntBASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 AL049873.1-201ENST00000480540 376 ntBASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 AC008489.1-201ENST00000524271 483 ntBASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 AP001804.3-201ENST00000525146 880 ntBASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 AP005205.1-201ENST00000563503 508 ntBASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 MIR3167-201ENST00000579623 85 ntBASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 AC103710.2-201ENST00000609912 942 ntBASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 LINC02471-203ENST00000641941 4752 ntBASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTFDC1Q9BY42 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 CR848007.1-201ENST00000442354 1699 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms