Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 MTND4P2-201ENST00000507767 1203 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 AC091965.2-201ENST00000512324 613 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 AP004371.1-201ENST00000525240 214 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 MTND4LP18-201ENST00000526864 291 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 AC007458.1-201ENST00000542812 373 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 BNIP3P5-201ENST00000562290 498 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 AP000787.2-201ENST00000604432 568 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 AC087752.4-201ENST00000605911 462 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 RN7SKP299-201ENST00000606679 301 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 AL020991.1-201ENST00000612314 373 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 AL590099.1-201ENST00000615276 138 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 AC027807.2-201ENST00000616099 408 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 AC007318.2-201ENST00000620999 243 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 AL161637.1-201ENST00000622380 412 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 AC068724.3-201ENST00000625906 87 ntBASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC28BQ9BUN5 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 AC009902.3-201ENST00000606235 2172 ntBASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 RNU6-1155P-201ENST00000363554 107 ntBASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 RNU4-24P-201ENST00000364565 139 ntBASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 MTCYBP36-201ENST00000404146 440 ntBASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 RNU4-65P-201ENST00000410473 140 ntBASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 RNU2-47P-201ENST00000410649 186 ntBASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 AL359704.1-201ENST00000411586 781 ntBASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 BTF3L4P1-201ENST00000413813 468 ntBASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 MTCO3P12-201ENST00000416718 547 ntBASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 RPL21P32-201ENST00000419877 477 ntBASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 BEND7P1-201ENST00000422058 457 ntBASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 AC007389.2-201ENST00000434630 306 ntBASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 AC016696.1-201ENST00000446949 318 ntBASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 AC112204.1-201ENST00000502591 103 ntBASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 AC010424.1-201ENST00000506336 297 ntBASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 AC017037.2-201ENST00000513850 890 ntBASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 AC026403.1-201ENST00000518938 295 ntBASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 AC103783.1-201ENST00000520506 373 ntBASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 AC107016.2-201ENST00000547968 190 ntBASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 MIR5697-201ENST00000578045 78 ntBASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 AC012669.1-201ENST00000603209 283 ntBASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 TUG1_1.1-201ENST00000610654 145 ntBASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 AC009878.1-201ENST00000621819 340 ntBASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 AC010338.1-201ENST00000621823 717 ntBASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 AC099506.2-201ENST00000623074 221 ntBASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 AC011460.1-201ENST00000636268 1834 ntBASIC2.91□□□□□ -1.94
CCDC28BQ9BUN5 MTND5P33-201ENST00000571250 1450 ntBASIC2.9□□□□□ -1.94
CCDC28BQ9BUN5 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.9□□□□□ -1.94
CCDC28BQ9BUN5 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 RNU1-33P-201ENST00000364249 162 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 RNA5SP515-201ENST00000364570 118 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 RNU6-533P-201ENST00000384144 107 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 RNU6-1181P-201ENST00000384191 106 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 Y_RNA.553-201ENST00000384670 102 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 SNORD67-201ENST00000390833 111 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 RNA5SP492-201ENST00000411330 114 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 MTND1P21-201ENST00000412991 285 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 RPS29P4-201ENST00000414733 161 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 CCDC58P2-201ENST00000417131 366 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 VN1R108P-201ENST00000431580 830 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 MTND1P28-201ENST00000435623 950 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 RPS24P6-201ENST00000452670 400 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 MTCO1P42-201ENST00000457379 726 ntBASIC2.9□□□□□ -1.95
CCDC28BQ9BUN5 RNU6-956P-201ENST00000458868 103 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms