Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 RPL23AP84-201ENST00000571193 464 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 MIR3671-201ENST00000580455 88 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 AL670379.6-201ENST00000603753 252 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 AL670379.11-201ENST00000604059 253 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 AL360085.1-201ENST00000604713 532 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 AC008162.1-201ENST00000604718 254 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 AL670379.1-201ENST00000604752 252 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 AL670379.5-201ENST00000605253 252 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 AL670379.12-201ENST00000605291 253 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 AL670379.8-201ENST00000605353 252 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 AL670379.7-201ENST00000605823 252 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 AC100778.3-201ENST00000580060 1750 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 AL672167.1-204ENST00000641875 3017 ntBASIC4.21□□□□□ -1.73
LRFN3Q9BTN0 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
LRFN3Q9BTN0 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.21□□□□□ -1.73
LRFN3Q9BTN0 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 SDAD1P2-201ENST00000441308 2028 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 RN7SKP44-201ENST00000363602 316 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 Y_RNA.166-201ENST00000363730 102 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 RNA5SP126-201ENST00000365092 109 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 AL136372.1-201ENST00000403060 228 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 AL035423.1-201ENST00000420331 213 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 MED13P1-201ENST00000428342 171 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 AC024082.2-201ENST00000434771 238 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 CYCSP24-201ENST00000445119 316 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 BTF3P6-201ENST00000448054 499 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 AC096576.1-201ENST00000489014 359 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 HMGN1P11-201ENST00000508668 303 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 RNU6-327P-201ENST00000516270 127 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 RNU6-1045P-201ENST00000516321 107 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 RNU6-840P-201ENST00000517275 65 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 AC090572.1-201ENST00000519251 160 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 AC105029.1-201ENST00000520250 669 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 ERHP1-201ENST00000523006 310 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 OR4R1P-201ENST00000529879 463 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 AP004242.1-201ENST00000533701 349 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 AC243972.3-201ENST00000539655 198 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 GNRHR2P1-201ENST00000555315 631 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 AL121821.2-201ENST00000556081 394 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 GLUD1P4-201ENST00000590914 418 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 AL121655.1-201ENST00000605811 308 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 C2orf27A-204ENST00000623058 969 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 AL136313.1-201ENST00000624804 202 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 GABPAP-201ENST00000419271 1356 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 AL445487.1-201ENST00000415694 1580 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 AC009812.4-201ENST00000569134 1805 ntBASIC4.21□□□□□ -1.74
LRFN3Q9BTN0 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.2□□□□□ -1.74
LRFN3Q9BTN0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.2□□□□□ -1.74
LRFN3Q9BTN0 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LRFN3Q9BTN0 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LRFN3Q9BTN0 AL137003.2-201ENST00000606924 2538 ntBASIC4.2□□□□□ -1.74
LRFN3Q9BTN0 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LRFN3Q9BTN0 OR5J1P-201ENST00000313544 939 ntBASIC4.2□□□□□ -1.74
LRFN3Q9BTN0 DEFB108F-201ENST00000344638 222 ntBASIC4.2□□□□□ -1.74
LRFN3Q9BTN0 SNORA31-201ENST00000362607 130 ntBASIC4.2□□□□□ -1.74
LRFN3Q9BTN0 Y_RNA.381-201ENST00000365666 102 ntBASIC4.2□□□□□ -1.74
LRFN3Q9BTN0 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
LRFN3Q9BTN0 RNU1-39P-201ENST00000383897 165 ntBASIC4.2□□□□□ -1.74
LRFN3Q9BTN0 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LRFN3Q9BTN0 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LRFN3Q9BTN0 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LRFN3Q9BTN0 AC110754.1-201ENST00000399740 601 ntBASIC4.2□□□□□ -1.74
LRFN3Q9BTN0 AL139095.1-201ENST00000404326 391 ntBASIC4.2□□□□□ -1.74
LRFN3Q9BTN0 RNA5SP239-201ENST00000410218 129 ntBASIC4.2□□□□□ -1.74
LRFN3Q9BTN0 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.2□□□□□ -1.74
LRFN3Q9BTN0 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.2□□□□□ -1.74
LRFN3Q9BTN0 MTATP6P4-201ENST00000427725 675 ntBASIC4.2□□□□□ -1.74
LRFN3Q9BTN0 SAR1AP4-201ENST00000429225 591 ntBASIC4.2□□□□□ -1.74
LRFN3Q9BTN0 AC097713.2-201ENST00000430199 356 ntBASIC4.2□□□□□ -1.74
LRFN3Q9BTN0 RPL36AP6-201ENST00000435770 321 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms