Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 AP002812.1-201ENST00000495378 474 ntBASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 SNORA18.6-201ENST00000516792 115 ntBASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 NRBF2P1-201ENST00000587407 859 ntBASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 AC119751.7-201ENST00000600494 245 ntBASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 AC104763.2-201ENST00000604179 382 ntBASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 AC097065.2-201ENST00000608159 533 ntBASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 AC007998.5-201ENST00000622938 237 ntBASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 RPS4XP5-202ENST00000449995 1334 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 AC005183.1-201ENST00000603687 1979 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 UBE2L2-201ENST00000254302 429 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 AC073343.1-201ENST00000328239 651 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 RNU6-270P-201ENST00000364131 105 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 RNU6-297P-201ENST00000384636 107 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 U8.11-201ENST00000384699 133 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 U8.12-201ENST00000384701 133 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 RPS3AP36-201ENST00000398190 775 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 AC099548.1-201ENST00000421443 426 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 AC018644.1-201ENST00000429934 551 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 AL445584.1-201ENST00000431451 330 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 AC104850.1-201ENST00000435940 476 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 KATNBL1P3-201ENST00000443475 909 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 AL133547.1-201ENST00000448546 220 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 U8.18-201ENST00000459285 133 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 AL133162.1-201ENST00000463228 453 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 RN7SL330P-201ENST00000469709 307 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 RPL7P5-201ENST00000471472 736 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 AC138853.1-201ENST00000503549 823 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 AC010424.1-201ENST00000506336 297 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 MTND4LP22-201ENST00000508209 276 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 SNORA31.3-201ENST00000516029 96 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 HMGB1P41-201ENST00000520234 440 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 NBR2-204ENST00000587322 63 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 AC098826.3-201ENST00000603823 466 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 AC136601.2-201ENST00000604356 474 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 AC090578.1-201ENST00000604955 591 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 AC007619.2-201ENST00000605743 379 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 AC107294.1-201ENST00000609524 467 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 AP000553.6-201ENST00000641242 118 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 AC119674.1-207ENST00000641355 633 ntBASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
HERPUD2Q9BSE4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 AL137003.2-201ENST00000606924 2538 ntBASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 FTLP6-201ENST00000355274 422 ntBASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 RNU6-960P-201ENST00000364056 120 ntBASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 AL359837.1-201ENST00000381357 287 ntBASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 PTMAP2-201ENST00000397627 327 ntBASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 AC010153.1-201ENST00000432862 727 ntBASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 SETP8-201ENST00000435341 628 ntBASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 USP9YP29-201ENST00000445112 563 ntBASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 AL360221.1-201ENST00000445989 335 ntBASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 AC006504.3-201ENST00000586818 523 ntBASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 RN7SKP299-201ENST00000606679 301 ntBASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 AL732372.2-225ENST00000642124 456 ntBASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 MTND5P29-201ENST00000458676 1807 ntBASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 MAPK10-373ENST00000641983 6772 ntBASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HERPUD2Q9BSE4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms